iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017555

Ensembl Protein ID

Bra001900.1-P

UniProt Accession

M4CCH0; M4CCH0_BRARP

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra001900	Bra001900.1	Bra001900.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	4.60e-16	59.8	120	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllaskk 74
            vkvs++g+++++++dl  + +++dL +a+++ +                         l+ se+ + YeD+dGD++ l++D++++++v+      
   Q: 120  LVKVSMDGAPYLRKVDLTMYKSYQDLSDALAKmFSsftmgnygaqgmidfmnesklmnLLNSSEYVPSYEDKDGDWM-LVGDVPWEMFVQ------ 208
           69******************************622566999**************9977788***************.************...... PP
   S: 75   sllrlliqk 83
           s++rl+i+k
   Q: 209  SCKRLRIMK 217
           ********8 PP

Organism

Brassica rapa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MIGQLMNLNA TELCLGLPGG TKAVESPAKS SVRNKRGFSE TMDLMLNLQC NKEETVDLNN 60
ATASKEKTLL KDPAKPPAKA QVVGWPPVRN YRKNMMTQQK TSGEEEASSE KAGNGGGAAL 120

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Nucleotide Sequence
(Fasta)

ATGATCGGAC AGCTTATGAA CCTTAACGCG ACGGAGCTCT GTCTCGGCCT CCCTGGCGGG 60
ACTAAAGCCG TCGAGAGCCC GGCCAAATCG TCGGTGAGGA ACAAGAGAGG CTTCTCCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006734	Arabidopsis thaliana	83.95	1.00e-113	401.00
IUUC-Bol-015767	Brassica oleracea	99.58	1.00e-127	447.00
IUUC-Gma-043505	Glycine max	77.31	7.00e-100	355.00
IUUC-Mtr-058575	Medicago truncatula	72.73	4.00e-87	313.00
IUUC-Sly-111331	Solanum lycopersicum	70.75	2.00e-82	298.00
IUUC-Stu-112437	Solanum tuberosum	65.45	1.00e-82	298.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence