iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121826

Ensembl Protein ID

EOY05882

UniProt Accession

A0A061END6; A0A061END6_THECC

Genbank Protein ID

EOY05882.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM001882

Gene Name

TCM_020774

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_020774	EOY05882	EOY05882

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.30e-16	60.7	138	235

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           +vkvs++g+++++++dl+ + ++++L +a+++ +                         l+ s++ ++YeD+dGD++ l++D++++++v+      s++rl
   Q: 138  FVKVSMDGAPYLRKVDLKMYKSYQELSDALAKmFSsftmgnygaqgmidfmnesklmdLLNSSDYVPTYEDKDGDWM-LVGDVPWEMFVD------SCKRL 231
           8*******************************62256699*****************88888***************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 232  RIMK 235
           ***8 PP

Organism

Theobroma cacao

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEVSRKMANM LGAERDLNFK ETELCLGLPG GGGGGGGGGG NEVETPKTTG KRGFSETVDL 60
KLNLQSKETG MDLNKNIENG SKEKTLLPAC TKDPAKPPAK AQVVGWPPVR SYRKNIMANQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAAACATAA TAGCGAAAGA AACCAGACAG AAGAAGCAGA GGCAAAAGCT ATATATCAAG 60
AAAACACAAG AGAGAGAGAG AGAGAGAGAG AGAGATAGGA GCAAAAGAAA GGAATAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:1900057--P:positive regulation of leaf senescence
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	61.11	1.00e-49	188.00
IUUC-Aly-005852	Arabidopsis lyrata	73.14	1.00e-92	331.00
IUUC-Ath-006734	Arabidopsis thaliana	70.12	5.00e-89	319.00
IUUC-Bol-015767	Brassica oleracea	71.54	4.00e-88	316.00
IUUC-Bra-017171	Brassica rapa	74.29	2.00e-92	330.00
IUUC-Cin-025707	Ciona intestinalis	26.26	7.50e-01	27.70
IUUC-Gma-043268	Glycine max	82.28	2.00e-108	384.00
IUUC-Lpe-050724	Leersia perrieri	47.19	2.00e-46	177.00
IUUC-Mtr-058575	Medicago truncatula	79.82	2.00e-90	323.00
IUUC-Mac-065450	Musa acuminata	65.91	8.00e-77	278.00
IUUC-Pop-099950	Populus trichocarpa	82.47	6.00e-111	392.00
IUUC-Ppe-101719	Prunus persica	81.12	2.00e-101	360.00
IUUC-Sly-111331	Solanum lycopersicum	78.47	2.00e-90	324.00
IUUC-Stu-112437	Solanum tuberosum	74.59	5.00e-89	319.00
IUUC-Sar-113090	Sorex araneus	30.61	3.40e-01	29.60

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence