iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__2825__AT5G66070.1	fgenesh2_kg.8__2825__AT5G66070.1	fgenesh2_kg.8__2825__AT5G66070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.40e-09	36.5	176	218

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df   ++ +++lp C H+fh+ C+ kw       + +++CPlCr
   Q: 176  CSVCLQDFqvgET-VRSLPqCHHMFHLPCIDKW------LRAHASCPLCR 218
           ********88555.*******************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDGYYSLSPI SLLHRVKDSF HFAVSALLAN LFSALFTFFF ALVGTLLGAL TGALIGQETE 60
SGFIRGAAVG AISGAVFSIE VFESSLLLWQ SDESGIGCLL YLIDVIASLL SGRLVRERIG 120

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Nucleotide Sequence
(Fasta)

AGATATGGAT GGTTATTATT CTCTGTCGCC CATCTCCCTC CTCCATCGGG TTAAAGATTC 60
CTTCCATTTC GCCGTCTCTG CCCTTCTCGC CAACCTCTTC TCCGCTCTCT TCACCTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR027367--Gly-zipper_YMGG
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13441--Gly-zipper_YMGG
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_497009

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007586	Arabidopsis thaliana	87.76	6.00e-99	352.00
IUUC-Bol-015652	Brassica oleracea	87.44	4.00e-100	356.00
IUUC-Bra-017744	Brassica rapa	88.52	7.00e-96	342.00
IUUC-Olu-087679	Ostreococcus lucimarinus	44.44	9.00e-11	61.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence