iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__3313__AT4G05320.4	fgenesh2_kg.6__3313__AT4G05320.4	fgenesh2_kg.6__3313__AT4G05320.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.50e-247	800.5	381	456
ULD/UDP/UBQ/UBQ_PIM	2.00e-168	547.4	381	453

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 381  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 456
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 381  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 453
           99********************************************************************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGMQIF VKTLTGKTIT LEVESSDTID NVKAKIQDKE GIPPDQQRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGATCT TTGTTAAGAC ACTCACCGGA AAGACTATCA CCCTCGAGGT GGAAAGCTCT 60
GACACCATCG ACAACGTTAA GGCCAAGATC CAGGACAAGG AAGGCATTCC TCCGGATCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005737--C:cytoplasm

KEGG

aly:ARALYDRAFT_490179

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006600	Arabidopsis thaliana	100.00	0.00e+00	903.00
IUUC-Bol-015598	Brassica oleracea	100.00	0.00e+00	903.00
IUUC-Ggo-044799	Gorilla gorilla	95.79	0.00e+00	725.00
IUUC-Hvu-047805	Hordeum vulgare	33.96	3.00e-39	155.00
IUUC-Pop-099637	Populus trichocarpa	100.00	0.00e+00	753.00
IUUC-Ppe-101604	Prunus persica	100.00	0.00e+00	903.00
IUUC-Sja-107825	Schizosaccharomyces japonicus	97.11	0.00e+00	741.00
IUUC-Sly-111036	Solanum lycopersicum	100.00	0.00e+00	903.00
IUUC-Stu-112104	Solanum tuberosum	100.00	0.00e+00	903.00
IUUC-Tca-120959	Theobroma cacao	99.78	0.00e+00	901.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence