iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017427

Ensembl Protein ID

Bra018097.1-P

UniProt Accession

M4DNL0; M4DNL0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra018097	Bra018097.1	Bra018097.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.30e-18	66.6	1222	1535

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw....kskkkavsprellkalkkeaee...fs 85
           tGl+N      C++N ++Q+L+n+  +r  +l+  +++l++      + ++++sl +++++l     + +k+ v+p++l  al+++ +    f+
   Q: 1222 TGLQNEvgEYNCFLNVIIQSLWNLGVFRAEFLR--SSTLDHH--HVGDPCVVCSLYEVLTALSaasrEIRKEPVTPSTLRIALSNLYPDssfFQ 1311
           57888733347**********************..4444444..3345566666666666665555599999*******999999988755688 PP
   S: 86   gyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgk 179
           + + +Da+E+la+++d l++++                        ++   + ++  + ++ + ++ q+ c +c+ +s r+ + +++  +++ +
   Q: 1312 EAQMNDASEVLAVIFDCLHRSF-----------------------AQSASVSDTDSSESNYTVPFE-QLNCYSCGLES-RHMKYTSFFHNINAS 1380
           9*********************.......................223333444444444555544.899****9988.777888888899877 PP
   S: 180  eetkke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
             ++++       ++++L+    ++++ ++   ++  c k      ++ l++ P+v++  L + +    ++++    +   ++ e+d+s +   
   Q: 1381 ALRNMKvtcpetAFDELLNLVEMNHQIACD--PETGGCGKPN--HIRHFLNTPPHVFTAVLGWQNTC--ESVEDIAATLAALNTEIDISIMYRG 1468
           766555666666888888888888888875..5677776544..56789**************9544..4677788888888888***954444 PP
   S: 268  peekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtev.keeevleetg...staYvlfYkr 337
                + k +Y+L +vv+++G     HY++++++++++ W+ +dD++V+++ ++++vl++++    ++ +l+Y++
   Q: 1469 ----LDPKSIYSLASVVCYYG----QHYHCFAYSHEHDrWIMYDDKTVKVIgSWTDVLSTCKkghLQPQLLLYEK 1535
           ....33489************....9*******976666************779****98777777778888877 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGQKEKPPAP RSKQSLSSSA AEAQPSSEVS ASTSYEEPSN LAEIKAECEK ALTSFRRGSY 60
NKAIRLMKES CSRHQHSALI HRVQGTVCVK VSSVYEDAVT KQKYIRSAIE SARKAVELSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCAGA AGGAGAAACC CCCCGCGCCT CGCTCCAAGC AATCGCTATC TTCTTCAGCG 60
GCGGAGGCTC AGCCGTCCTC TGAGGTTTCC GCTTCTACCT CCTATGAGGA GCCGTCAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006866--DUF627_N
IPR006865--DUF629
IPR001394--Peptidase_C19_UCH
IPR011990--TPR-like_helical_dom
IPR028889--USP_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF04781--DUF627
PF04780--DUF629
PF00443--UCH

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence