iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005872

UUCD1 version

UUC-ArL-01019

Ensembl Protein ID

fgenesh2_kg.7__41__AT4G38480.1

UniProt Accession

D7MEZ2; D7MEZ2_ARALL

Genbank Protein ID

EFH43060.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_490608

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__41__AT4G38480.1	fgenesh2_kg.7__41__AT4G38480.1	fgenesh2_kg.7__41__AT4G38480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-22	79.6	54	87

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H++ v++++f  d +ll+sGsdD+++ +WD+ t 
   Q: 54   HKGCVNSVSFnADgDLLLSGSDDKQVILWDWETA 87
           99*********666****************9876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSGRPAKRPR IDHSVVNVWE REVGLLPNRS FSNRFSASED LLRRLGLDKK LDKHKGCVNS 60
VSFNADGDLL LSGSDDKQVI LWDWETASVK LSFDSGHFNN VFQAKFMPFS DDRSIVTSAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGATCTGG TGGGGACGAT GAGTGGACGG CCGGCGAAAA GGCCGAGGAT CGACCATTCC 60
GTCGTGAATG TCTGGGAACG GGAGGTCGGT CTCTTGCCCA ATCGCAGTTT CTCCAACCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

aly:ARALYDRAFT_490608

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006619	Arabidopsis thaliana	94.88	0.00e+00	784.00
IUUC-Bol-015450	Brassica oleracea	76.39	0.00e+00	669.00
IUUC-Bra-017498	Brassica rapa	78.28	0.00e+00	677.00
IUUC-Cho-024527	Choloepus hoffmanni	27.71	2.00e-26	114.00
IUUC-Cin-025683	Ciona intestinalis	43.16	3.00e-74	271.00
IUUC-Csv-026331	Ciona savignyi	41.67	3.00e-65	241.00
IUUC-Dme-032115	Drosophila melanogaster	38.62	1.00e-64	240.00
IUUC-Oan-072748	Ornithorhynchus anatinus	28.67	8.00e-21	94.00
IUUC-Smo-109128	Selaginella moellendorffii	52.37	4.00e-112	397.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence