iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  +d+ ++lp CgH fh dC+  w       + + +CPlCr
   Q: 108  CSVCLSEFeeEDEGRLLPkCGHSFHVDCIDTW------FRSRSTCPLCR 150
           ********77555888999*************......9999******8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGIGEESTKP IWGSVSHTSS GYALNGKIML SSVIVLFVAV IMILCFHSYA RWLFRRHNRR 60
IRRRIRSHLR TLSASPRDQA LDQAVLDKIP IFVYSSKNPP PPEEKEECSV CLSEFEEEDE 120

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Nucleotide Sequence
(Fasta)

ACTTTTATTA AAGAACTTGT CCACTGTCTT CTTCTGCCCA TTTTACCATT TTGATTAGGC 60
TCTCTGTTTC TCTTTCTTGG TTCTAAAAGA TATCCGTCAC TCTTTAGTAT TATGGGAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005769--C:early endosome
GO:0005798--C:Golgi-associated vesicle
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0071470--P:cellular response to osmotic stress
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0030100--P:regulation of endocytosis
GO:1901000--P:regulation of response to salt stress

KEGG

ath:AT2G47560

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005583	Arabidopsis lyrata	91.63	1.00e-96	344.00
IUUC-Bdi-014898	Brachypodium distachyon	49.45	2.00e-19	88.60
IUUC-Bol-015580	Brassica oleracea	62.90	1.00e-47	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence