iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017545

Ensembl Protein ID

Bra005309.1-P

UniProt Accession

M4CM72; M4CM72_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005309	Bra005309.1	Bra005309.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-25	88.9	1	61

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 15   MrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           M+dPv++++Gitydr sIekwl s +k +cPvt+q +t+ dl+Pn+tlrrliq+wc  n+s
   Q: 1    MKDPVIVSTGITYDRDSIEKWLFSAKKnSCPVTKQDITDADLTPNHTLRRLIQSWCTVNAS 61
           9*********************8887779***************************99875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKDPVIVSTG ITYDRDSIEK WLFSAKKNSC PVTKQDITDA DLTPNHTLRR LIQSWCTVNA 60
SHGVERIPTP RPPISKSEIE KLLKDSASSH QNLAKCFKRL RHIVSENASN KRCLEAAGVP 120

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Nucleotide Sequence
(Fasta)

ATGAAAGATC CGGTGATAGT CTCTACCGGA ATAACCTATG ACAGAGACAG CATCGAGAAA 60
TGGCTCTTTT CAGCAAAAAA GAACTCGTGT CCGGTCACCA AACAAGACAT AACCGACGCA 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence