iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016711

Ensembl Protein ID

Bra005566.1-P

UniProt Accession

M4CMX8; M4CMX8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005566	Bra005566.1	Bra005566.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-33	112.0	645	682
UBD/Beta-Prp	1.90e-47	162.9	445	579

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH++ v+++++ ++  l++s s D ++k+W+l +g++++
   Q: 645  GHSANVNSVCWnPSgELIASVSED-SVKLWSLNSGDCIH 682
           8***********666*********.9***********87 PP

UBD/Beta-Prp

   S: 86   cvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltgght 180
            v+++++ +++v +++fs +g+ l+s++hd+ + +w++et    +   ++h ++++ v++ p++  l+++s D+t+++Wd  + g  +rt tg ht
   Q: 445  EVSSIRRSSNKVICCNFSSDGKLLASAGHDKKLYIWNMETLITES-APEEHGHIITDVRFRPNSTQLATSSFDKTIKIWDAsEPGYFVRTITG-HT 538
           578899999*******************************99999.9*********************************9788999****99.** PP
   S: 181  dsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlng 220
            +v sl+f++++   + s++ ++ +++w++ + +c r  ++
   Q: 539  APVMSLDFHPKKtDLFCSCDGNNEIRFWNINAANCFRVIKA 579
           **********9955678**************9999887665 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIYDYL VKKKLHNTAK SFMTEGKVSP DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEAAAAYIE AQQGKAREQQ LQVQQMQMMR QAQMQQRRDP SLGGPMNAIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAGA GTAATTGGGA AGCTGATAAG ATGTAAGTGG ATCGTCTAGT TAAAGTGTGT 60
AACTTTTCCA ATTCCAAGAT TCTATTTTTT TTTGCTCACT TTCCTTTGTT GGGTGTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence