iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131470

Ensembl Protein ID

VIT_13s0019g01680.t01

UniProt Accession

D7SQ19; D7SQ19_VITVI

Genbank Protein ID

CBI17748.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594963

Gene Name

VIT_13s0019g01680

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0019g01680	VIT_13s0019g01680.t01	VIT_13s0019g01680.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-21	74.7	173	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cl   + +l+ sGs+D+t+kvW++ + ++l 
   Q: 173  HADSISCLTIcN-GLIYSGSWDKTLKVWRIADLKCLE 208
           9********955.****************99999985 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MNSSKTTPST PLLSAVTSSS SDGDDDSPVE RYGLEDVEYQ LSSVPVCGLP SYKSLAVLSG 60
HVGSVSCLAL CGEFILSASQ GKDIIVWQQP DLRQFTKFGQ GEGSVKALVT VGHKVFTAHQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATTCTT CTAAAACCAC ACCCTCAACT CCATTGCTGT CTGCAGTAAC AAGCAGCAGC 60
AGTGATGGTG ATGATGACAG TCCAGTGGAG CGGTATGGGC TAGAAGATGT TGAGTATCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	71.61	5.00e-133	466.00
IUUC-Aly-005620	Arabidopsis lyrata	71.94	1.00e-143	501.00
IUUC-Ath-006729	Arabidopsis thaliana	70.99	2.00e-142	498.00
IUUC-Bdi-014229	Brachypodium distachyon	56.80	3.00e-98	350.00
IUUC-Bol-015324	Brassica oleracea	68.70	1.00e-138	485.00
IUUC-Bra-017666	Brassica rapa	66.93	3.00e-137	480.00
IUUC-Gma-043773	Glycine max	80.73	2.00e-156	544.00
IUUC-Hvu-047162	Hordeum vulgare	55.36	1.00e-74	271.00
IUUC-Lpe-050845	Leersia perrieri	55.56	9.00e-92	329.00
IUUC-Mtr-058525	Medicago truncatula	79.10	1.00e-158	551.00
IUUC-Mac-064928	Musa acuminata	67.06	2.00e-115	407.00
IUUC-Oba-075989	Oryza barthii	60.63	1.00e-114	405.00
IUUC-Obr-076522	Oryza brachyantha	60.46	2.00e-115	407.00
IUUC-Ogl-077747	Oryza glaberrima	59.49	5.00e-113	400.00
IUUC-Ogu-078306	Oryza glumaepatula	60.64	6.00e-112	396.00
IUUC-Oin-079397	Oryza indica	60.76	7.00e-112	396.00
IUUC-Olo-080627	Oryza longistaminata	62.61	5.00e-78	283.00
IUUC-Ome-081295	Oryza meridionalis	60.17	5.00e-111	393.00
IUUC-Oni-082259	Oryza nivara	59.49	5.00e-113	400.00
IUUC-Opu-083686	Oryza punctata	62.24	4.00e-115	407.00
IUUC-Oru-084598	Oryza rufipogon	60.76	7.00e-112	396.00
IUUC-Osa-085705	Oryza sativa	59.49	2.00e-107	381.00
IUUC-Pop-099519	Populus trichocarpa	80.17	9.00e-173	598.00
IUUC-Ppe-101179	Prunus persica	80.60	2.00e-171	593.00
IUUC-Sit-109966	Setaria italica	62.54	4.00e-110	390.00
IUUC-Sly-111222	Solanum lycopersicum	79.26	6.00e-155	539.00
IUUC-Stu-112315	Solanum tuberosum	78.77	4.00e-166	576.00
IUUC-Sbi-114323	Sorghum bicolor	58.81	5.00e-105	373.00
IUUC-Tca-121448	Theobroma cacao	81.20	2.00e-171	593.00
IUUC-Tae-123437	Triticum aestivum	56.59	2.00e-105	374.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence