iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121040

Ensembl Protein ID

EOY03861

UniProt Accession

A0A061EG35; A0A061EG35_THECC

Genbank Protein ID

EOY03861.1

Protein Name

Pentatricopeptide repeat (PPR) superfamily protein, putative

Genbank Nucleotide ID

CM001882

Gene Name

TCM_019062

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_019062	EOY03861	EOY03861

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	24.37	5.80e-01	33.50	IUUC-Cel-018324

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MALKISYFHF PKLLFSYSSS GKHFFQFLSV SLTKNQPITR KKKTFSHIFQ ECSNQTSLNP 60
GKQAHCQMII SGFIPTIFVA NCLIQLYIKC GNLGYANKVF DRMSQRDIVS WNALVFGYAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGTGACCC TGTTGTGCAA GGCAGAGAGA GGAAGTGGAA CTTTTCTGCG TAGAAAAATG 60
AAGAAAAATC GAGAGTATGA AAAAGAATTA CAAGAACAAA TATGAAGCAA AAAGAATATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032867--DYW_dom
IPR002885--Pentatricopeptide_repeat
IPR011990--TPR-like_helical_dom

PROSITE

PS51375--PPR

Pfam

PF14432--DYW_deaminase
PF01535--PPR
PF13041--PPR_2

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002827	Amborella trichopoda	27.82	4.00e-54	204.00
IUUC-Apl-003803	Anas platyrhynchos	45.45	1.50e-01	31.60
IUUC-Ath-006990	Arabidopsis thaliana	27.97	5.00e-103	368.00
IUUC-Bdi-014037	Brachypodium distachyon	27.63	1.00e-51	196.00
IUUC-Bol-016246	Brassica oleracea	33.73	5.00e-144	504.00
IUUC-Cel-018324	Caenorhabditis elegans	24.37	1.60e-02	33.10
IUUC-Lpe-050946	Leersia perrieri	33.44	2.00e-102	365.00
IUUC-Mtr-058695	Medicago truncatula	34.28	4.00e-107	381.00
IUUC-Oba-075207	Oryza barthii	35.00	2.00e-59	223.00
IUUC-Ome-081873	Oryza meridionalis	36.63	4.00e-67	248.00
IUUC-Pop-100074	Populus trichocarpa	29.10	2.00e-20	92.00
IUUC-Ppe-101554	Prunus persica	28.31	9.00e-86	310.00
IUUC-Smo-109647	Selaginella moellendorffii	29.68	5.00e-79	288.00
IUUC-Tur-126385	Triticum urartu	34.09	7.00e-93	334.00
IUUC-Vvi-131307	Vitis vinifera	34.86	1.00e-80	293.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence