iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016445

Ensembl Protein ID

Bo4g140020.1

UniProt Accession

A0A0D3C055; A0A0D3C055_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo4g140020	Bo4g140020.1	Bo4g140020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-24	85.4	274	309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           H+++vtc+   +++l sGs D tikvWDl t  ++ 
   Q: 274  HSGEVTCFIVGGHRLYSGSVDRTIKVWDLNTLECTM 309
           99*****7543489***************9999875 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MSYKAPRRYS NGRNFGVERQ QDFVADIVPR RPYENKGSNK WSRNLVWTAS GANKPRKNGN 60
TYGSTKPQVS GAGALVSNQQ RKDAAYVQRS SSVSDTRGWG SSDRGSPKSK ECVCKFWKAG 120

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Nucleotide Sequence
(Fasta)

ATGAGTTACA AGGCGCCAAG GAGATACTCT AACGGAAGGA ACTTCGGAGT GGAAAGACAA 60
CAAGATTTTG TAGCTGATAT AGTTCCCAGA AGACCTTATG AAAACAAGGG TTCAAATAAG 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence