iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099294

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_817370; POPTR_0003s13000g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s13000	POPTR_0003s13000.1	POPTR_0003s13000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-08	35.6	166	207

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle++  +++ l++ C H++h++C+  w        ++ +CP+C+
   Q: 166  CPICLEEYdlENPKLTTKCEHHYHLSCILEW------MERSESCPVCD 207
           ******887788556688*************......999*******5 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGGCCCGSAN GAADQFNNAP PFFYYPRTSE EHVSLSSHQA PGSVLQSTGL LVDTNLDTSV 60
PDAYRPPPAP IPFDAAVGRP QTPGRLREVR GDKNHGALQT TTSASGQENT ALNTREPLAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGCTTGTT TTTCAGTGAA AGTCGTTCTC GGACACGAAA GTACACCCCC TCTTCCTCCC 60
TGCCAAAAAA GAAAAAAGAA AACCATTTCC GTAATCCCGT TGGCTTGCCT CAAGACAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0003s13000g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005682	Arabidopsis lyrata	47.49	7.00e-40	156.00
IUUC-Ath-006898	Arabidopsis thaliana	44.61	3.00e-40	157.00
IUUC-Bol-015746	Brassica oleracea	49.09	2.00e-36	144.00
IUUC-Bra-017455	Brassica rapa	46.36	1.00e-36	145.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence