iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111602

Ensembl Protein ID

Solyc11g006030.1.1

UniProt Accession

K4D4L6; K4D4L6_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc11g006030.1	Solyc11g006030.1.1	Solyc11g006030.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-33	114.6	22	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++flCpIsl+lM+dPv+l++Gi+ydr++Iekw++  ++tcPvt+q+l++ +l+Pn+++r++iq+wc en++
   Q: 22   IPSHFLCPISLDLMKDPVTLCTGISYDRENIEKWIEARNSTCPVTNQHLRNFNLIPNHAIRKTIQDWCVENKN 94
           8********************************************************************9985 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MIFSWIRKKK VTKLNSCKEL TIPSHFLCPI SLDLMKDPVT LCTGISYDRE NIEKWIEARN 60
STCPVTNQHL RNFNLIPNHA IRKTIQDWCV ENKNYGIERV PTPRIPIDSS QVTEICSRLM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTTTTT CGTGGATACG TAAAAAGAAG GTTACAAAAT TGAACTCTTG TAAAGAACTT 60
ACGATTCCAT CTCATTTTCT TTGTCCGATT TCTCTTGATT TAATGAAAGA TCCAGTCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006171	Arabidopsis lyrata	46.23	1.00e-93	336.00
IUUC-Ath-007692	Arabidopsis thaliana	46.72	4.00e-92	330.00
IUUC-Bol-016269	Brassica oleracea	43.36	1.00e-94	340.00
IUUC-Bra-017285	Brassica rapa	43.18	5.00e-96	343.00
IUUC-Gma-042862	Glycine max	46.62	9.00e-109	386.00
IUUC-Pop-099312	Populus trichocarpa	53.57	5.00e-127	446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence