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Tag Content
iUUCD ID IUUC-Mtr-057637
Ensembl Protein ID AES61661
UniProt Accession G7IDR0; A0A0C3URC3; G7IDR0_MEDTR
Genbank Protein ID AES61661.2
Protein Name WD40/YVTN repeat containing domain-containing protein
Genbank Nucleotide ID CM001217
Gene Name MTR_1g087120
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
MTR_1g087120 AES61661 AES61661
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 2.10e-24 86.0 408 444
UBD/Beta-Prp 1.30e-42 147.5 320 587
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWDlrt 32
    gH + v+ +af ++ +l+s+sdDgt+++WD r+
   Q: 408 GHDAAVNTIAFsprPNavYHLLSASDDGTCRIWDARS 444
    89************777899**************776 PP
   


   UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
    k+l+gh+ +v + f +++++++gs+d+ +k+w+++t +l+s gh + +t++ s++ + +++s+D +i+vw l +g v++l+gh++ v +++fs
   Q: 320 KKLRGHRVAVYC-AIFDGSGRYVISGSDDRLVKIWSMETAFCLASCRGHRGDITDLAVSSNNVLVASASNDFVIRVWRLPDGMSVSVLRGHDAAVNTIAFS 419
    667777776666.8999********************************************99************************************** PP
   S: 104 p..sg.dklvsGshdrtirvwdletgqclee.......................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.......ktgkl 171
    p + ++l+s+s+d t r+wd ++ q ++++ + c +++ +g ++v+Gs D++ r+W+ + +
   Q: 420 PrpNAvYHLLSASDDGTCRIWDARSSQNPCIyvprpsdaingkgnappanlpssSNAQRGLQILCCAFNANGTVFVTGSSDTFARVWSAckpntdnSEQPP 520
    *99777******************9886555669*******************999999999*************************99*99999866667 PP
   S: 172 lrtl..tgghtdsvysls.............fdsng................kelvsgsldgtvklwdlq 210
    ++++ +gh+++v+ ++ + +v++s+dg+ ++w +
   Q: 521 IHEMdlLSGHENDVNYVQfsgcavsskvmtsD---SwkeentqkfrnfryshDNIVTCSRDGSAIIWVPR 587
    888788555*********66666666665550...15555566666666666***************665 PP
   

Organism Medicago truncatula
Protein Sequence
(Fasta)
MEIGFFAVKP IIVVAASLSS TQLFSQGEGL KPRSERSQVR IHQVPTIPMS GQSTQSFALA 60
SLSPCKWTVG SVPRISRSLG CFSNMDSKMC KPCTGVASSM NGVPLSVPNQ EDEMARSLKD 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mtr-057637|E3,WD_repeat;UBD,Beta-Prp|Medicago truncatula
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAAATTG GTTTCTTTGC TGTTAAACCT ATCATTGTAG TTGCTGCTTC ACTATCTTCA 60
ACTCAATTGT TTTCTCAGGT ATTTTTTTAA CGACCCTTTT GCCCCTTTCT GTGTTTTCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mtr-057637|E3,WD_repeat;UBD,Beta-Prp|Medicago truncatula
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR010525--Auxin_resp
IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF06507--Auxin_resp
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0006355--P:regulation of transcription, DNA-templated
GO:0009725--P:response to hormone

KEGG mtr:MTR_1g087120
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-006517 Arabidopsis lyrata 70.24 0.00e+00 1121.00
IUUC-Ath-006577 Arabidopsis thaliana 67.19 0.00e+00 1105.00
IUUC-Bol-016525 Brassica oleracea 66.78 0.00e+00 1081.00
IUUC-Cre-023003 Chlamydomonas reinhardtii 34.30 6.00e-33 135.00
IUUC-Cin-025702 Ciona intestinalis 36.02 2.00e-29 122.00
IUUC-Gma-042820 Glycine max 72.02 0.00e+00 2277.00
IUUC-Itr-047962 Ictidomys tridecemlineatus 25.59 5.00e-21 95.50
IUUC-Obr-076619 Oryza brachyantha 59.84 0.00e+00 1023.00
IUUC-Ppa-095793 Physcomitrella patens 55.92 0.00e+00 836.00
IUUC-Pop-099672 Populus trichocarpa 64.41 0.00e+00 1142.00
IUUC-Ppe-101283 Prunus persica 64.66 0.00e+00 1194.00
IUUC-Sly-111348 Solanum lycopersicum 68.99 0.00e+00 1006.00
IUUC-Sbi-114195 Sorghum bicolor 69.86 0.00e+00 811.00
IUUC-Tca-121615 Theobroma cacao 54.30 0.00e+00 1542.00
Created Date 25-Jun-2017

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