iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016684

Ensembl Protein ID

Bra015297.1-P

UniProt Accession

M4DFM4; M4DFM4_BRARP

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra015297	Bra015297.1	Bra015297.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.80e-17	64.3	90	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqk 83
           v vkvs++g+++++++dl+ + ++++Llka++  +           ++k+s++ ++YeD+dGD++ l +D++++++v        ++rl+i+k
   Q: 90   VYVKVSMDGAPYLRKIDLSCYKGYKELLKALEImFNfsvgeyfereGYKGSDFVPTYEDKDGDWM-LIGDVPWEMFVC------TCKRLRIMK 175
           78*******************************6237789999999*******************.************......9******98 PP

Organism

Brassica rapa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MDEFVNLKET ELRLGLPGTD NVSEEIERVS CNKRALQGDT ENETESSMMK METCPPRKAQ 60
IVGWPPVRSS RKNIIQTKKN ESDSEGGRGV YVKVSMDGAP YLRKIDLSCY KGYKELLKAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGAGT TTGTTAACCT AAAGGAAACG GAGCTGAGGC TAGGATTACC AGGAACAGAC 60
AATGTGAGTG AAGAAATAGA AAGAGTTTCT TGCAATAAAA GAGCATTACA AGGTGACACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007370	Arabidopsis thaliana	84.74	4.00e-91	327.00
IUUC-Ani-009172	Aspergillus nidulans	31.15	1.50e+00	26.90
IUUC-Bdi-014020	Brachypodium distachyon	48.99	5.00e-39	153.00
IUUC-Bol-015408	Brassica oleracea	95.16	3.00e-102	363.00
IUUC-Hvu-047853	Hordeum vulgare	47.57	1.00e-40	159.00
IUUC-Lpe-051475	Leersia perrieri	46.50	1.00e-35	142.00
IUUC-Mla-059044	Melampsora laricipopulina	36.36	4.70e-01	30.40
IUUC-Oba-075141	Oryza barthii	51.01	8.00e-47	179.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence