iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076820

Ensembl Protein ID

OB02G38410.1

UniProt Accession

J3LGS4; J3LGS4_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G38410	OB02G38410.1	OB02G38410.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.40e-33	114.7	76	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +pe+f+CpIslelMrdPv++++G+ty+r+ I++w++ g++tcP+t+q+l++ +l+Pn++lr+li +wcee+++
   Q: 76   IPEDFRCPISLELMRDPVIVSTGQTYERAFIQRWIDCGNRTCPKTQQKLQNLTLTPNYVLRSLILHWCEEKGI 148
           8********************************************************************9986 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MENLCNGHLE LQNIIILVSE ISGVPKSDAE RLTSQLIEGL ENMRVTDSKK PVNVSQSSDE 60
TKGSAETQKK SDTVAIPEDF RCPISLELMR DPVIVSTGQT YERAFIQRWI DCGNRTCPKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAATCACAC GATCAGCCAG GCACACCACA AATGGAGAAC TTATGCAATG GTCACCTGGA 60
GTTGCAAAAT ATCATTATAC TTGTTTCAGA AATAAGTGGT GTGCCCAAGT CTGACGCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000977	Aegilops tauschii	86.50	0.00e+00	756.00
IUUC-Aly-005733	Arabidopsis lyrata	67.19	1.00e-137	482.00
IUUC-Ath-007555	Arabidopsis thaliana	65.31	8.00e-142	496.00
IUUC-Bdi-014341	Brachypodium distachyon	86.06	0.00e+00	772.00
IUUC-Bol-015936	Brassica oleracea	63.16	1.00e-142	499.00
IUUC-Bra-016825	Brassica rapa	63.41	4.00e-143	500.00
IUUC-Gma-044210	Glycine max	63.09	6.00e-156	543.00
IUUC-Hvu-047676	Hordeum vulgare	91.74	0.00e+00	645.00
IUUC-Lpe-051513	Leersia perrieri	96.01	0.00e+00	875.00
IUUC-Mtr-058156	Medicago truncatula	63.84	7.00e-152	530.00
IUUC-Mac-065650	Musa acuminata	65.53	4.00e-147	514.00
IUUC-Oba-075045	Oryza barthii	96.45	0.00e+00	877.00
IUUC-Ogl-077779	Oryza glaberrima	96.45	0.00e+00	878.00
IUUC-Ogu-078572	Oryza glumaepatula	96.45	0.00e+00	878.00
IUUC-Oin-079487	Oryza indica	96.45	0.00e+00	878.00
IUUC-Olo-080348	Oryza longistaminata	96.45	0.00e+00	878.00
IUUC-Ome-081282	Oryza meridionalis	95.79	0.00e+00	870.00
IUUC-Oni-083061	Oryza nivara	96.45	0.00e+00	878.00
IUUC-Opu-083297	Oryza punctata	97.34	0.00e+00	851.00
IUUC-Oru-084442	Oryza rufipogon	96.45	0.00e+00	878.00
IUUC-Osa-085919	Oryza sativa	96.45	0.00e+00	878.00
IUUC-Pop-099907	Populus trichocarpa	67.09	9.00e-152	529.00
IUUC-Ppe-101146	Prunus persica	67.09	5.00e-143	500.00
IUUC-Ptt-103922	Puccinia triticina	27.36	2.00e-08	52.40
IUUC-Sit-110422	Setaria italica	85.84	0.00e+00	770.00
IUUC-Sly-111534	Solanum lycopersicum	62.91	3.00e-144	504.00
IUUC-Stu-112138	Solanum tuberosum	63.38	1.00e-146	512.00
IUUC-Sbi-114533	Sorghum bicolor	86.06	0.00e+00	775.00
IUUC-Tca-121496	Theobroma cacao	67.64	3.00e-154	537.00
IUUC-Tae-125340	Triticum aestivum	86.32	0.00e+00	745.00
IUUC-Tur-126634	Triticum urartu	84.73	0.00e+00	697.00
IUUC-Vvi-131185	Vitis vinifera	60.99	4.00e-152	530.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence