iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017533

Ensembl Protein ID

Bra022417.1-P

UniProt Accession

M4E0W8; M4E0W8_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022417	Bra022417.1	Bra022417.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.50e-35	119.7	13	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p +f+CpIslelMrdPv++++G+tydr+sIe w+++g++  tcPvtr+pl++++l+Pn+tlrrliq+wc +n+s
   Q: 13   QIPYHFRCPISLELMRDPVTVCTGQTYDRTSIESWVSTGNNntTCPVTRAPLSDHTLIPNHTLRRLIQEWCVANRS 88
           5899********************************9988888*****************************9986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MPRSLEPLDL GLQIPYHFRC PISLELMRDP VTVCTGQTYD RTSIESWVST GNNNTTCPVT 60
RAPLSDHTLI PNHTLRRLIQ EWCVANRSNG VERIPTPKQP ADPTSVRALL SQASAACGTH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGAGAA GTCTAGAGCC GTTGGATCTA GGACTCCAGA TACCGTACCA CTTCAGATGT 60
CCAATCTCAC TAGAGCTGAT GCGTGACCCG GTAACCGTCT GCACCGGTCA AACCTACGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016134	Brassica oleracea	95.02	0.00e+00	709.00
IUUC-Gma-043153	Glycine max	66.35	1.00e-153	535.00
IUUC-Mtr-058307	Medicago truncatula	64.56	5.00e-137	480.00
IUUC-Pop-099142	Populus trichocarpa	67.45	4.00e-150	523.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence