iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111118

Ensembl Protein ID

Solyc01g109120.2.1

UniProt Accession

K4B3C6; K4B3C6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g109120.2	Solyc01g109120.2.1	Solyc01g109120.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-30	102.8	228	265
UBD/Beta-Prp	1.20e-40	140.3	124	387

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v+c+++  + +ll sGs+D+t+kvW+l++ +++ 
   Q: 228  HFDAVSCMSLdKErGLLYSGSWDKTLKVWRLSDSKCIE 265
           8899******86679*****************999975 PP

UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls....................... 82
           +++   +++ll tgs+++ i+vw++ +    + ++ +++ v+a+    d   + tg++D+ i+vw +                        
   Q: 124  SLAA--SGDLLYTGSDSKNIRVWKNLK--EYSGFKCQSGLVKAIVVYGD--KIFTGHQDGKIRVWKFLgkkrkaykrvgslptvrdylkss 208
           4444..899****************99..45799999999*******99..69************55555666777999999999999999 PP
   S: 83   ..........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrl 163
                      +  v  + +h d v ++s+++++  l sGs+d+t++vw l+  +c+e   + h++++n+vvv +++ l+++Gs+D+tv+ 
   Q: 209  inpkayvevrRNRNVPWI-KHFDAVSCMSLDKERGLLYSGSWDKTLKVWRLSDSKCIE-SINAHQDAINSVVV-GFDGLVFTGSADGTVKA 296
           966666666444444444.6**************************************.66677777777665.4579************* PP
   S: 164  Wdl......ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsi 246
           W+       +   l++tl + ++++v+sl+++     + +gs dg  ++w+ q+       +l+gh+  v++v++   + +++sgs+D+si
   Q: 297  WRRelvgnnAKHVLVETLLK-QDNAVTSLAVNAAAATVYAGSSDGLANFWERQKHFLeyGGALRGHKLAVLCVAVA--GSLVLSGSADKSI 384
           *******999999******9.*******************************9654422679**************..************* PP
   S: 247  riW 249
            +W
   Q: 385  CVW 387
           *** PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MTRKNNSMGA MLLQKESFRR TKFGTLLYSD PISDHEESSN NSARSSNASS APSPPRTSSF 60
NGTNTTANNS PNYFMSPWNQ SGSPYVKSPW IHQPLLDSSE ESESSDFKNG LIGSLVREEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATACAATCTT CTTCTCATTC TTCCATTACT CAATTCACAA ACCTCTACAT CTATTACAAA 60
CCAAATTCAC TCCAAAAAAT CAACAATCAT AATTTGTACA TATTATCATT CAATTCATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sly:101258501

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006874	Arabidopsis thaliana	56.78	3.00e-136	477.00
IUUC-Bol-016061	Brassica oleracea	62.95	3.00e-129	454.00
IUUC-Gma-042921	Glycine max	56.30	4.00e-124	437.00
IUUC-Pop-099212	Populus trichocarpa	61.26	5.00e-158	550.00
IUUC-Ppe-101355	Prunus persica	67.34	3.00e-147	514.00
IUUC-Stu-112572	Solanum tuberosum	96.13	0.00e+00	754.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence