iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007188

UUCD1 version

UUC-ArT-00230

Ensembl Protein ID

AT3G09760.1

UniProt Accession

Q940P1; Q940P1_ARATH

Genbank Protein ID

AAL06891.1; AAM47479.1; AAY57598.1; AEE74809.1

Protein Name

At3g09760/F8A24.19; RING finger family protein; RING/U-box superfamily protein

Genbank Nucleotide ID

AY054231; AY113176; DQ059112; CP002686

Gene Name

At3g09760

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G09760	AT3G09760.1	AT3G09760.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MMDDKARKEE EHHVSHQHNH SPLQRDGNSA EIAQGQELSS PGRDLWRRGL VLDLPSTTPE 60
DTTRDDLFRR NASLTSSPVA KRVNFSPMSS PRVGQRGASL SPSSSTSSSS RNKPNSLKNL 120

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Nucleotide Sequence
(Fasta)

CAAATTTAGG CCGAGAAAAT GGGACATTGT GATATAATCT CAAAAAGAAT TGAAATTTGT 60
ATGATCGATC AGATATCTCA ATTTCAGGAA CCCAGAAAGA GGGACTTGTC TTTTACCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ath:AT3G09760

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005684	Arabidopsis lyrata	92.06	0.00e+00	840.00
IUUC-Bol-016247	Brassica oleracea	73.99	0.00e+00	694.00
IUUC-Bra-017315	Brassica rapa	74.79	0.00e+00	667.00
IUUC-Cre-023008	Chlamydomonas reinhardtii	41.30	1.00e-06	48.10
IUUC-Gma-043479	Glycine max	51.66	9.00e-119	419.00
IUUC-Mtr-058438	Medicago truncatula	50.11	9.00e-108	383.00
IUUC-Pop-099336	Populus trichocarpa	49.49	2.00e-105	375.00
IUUC-Ppe-101419	Prunus persica	49.80	8.00e-121	426.00
IUUC-Smo-109293	Selaginella moellendorffii	41.67	2.00e-10	60.10
IUUC-Tca-121343	Theobroma cacao	52.77	1.00e-123	436.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence