iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112321

Ensembl Protein ID

PGSC0003DMT400058815

UniProt Accession

M1C3C8; M1C3C8_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400022853	PGSC0003DMT400058813	PGSC0003DMT400058813
PGSC0003DMG400022853	PGSC0003DMT400058814	PGSC0003DMT400058814
PGSC0003DMG400022853	PGSC0003DMT400058815	PGSC0003DMT400058815
PGSC0003DMG400022853	PGSC0003DMT400058816	PGSC0003DMT400058816
PGSC0003DMG400022853	PGSC0003DMT400058817	PGSC0003DMT400058817

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	51.26	3.00e-94	342.00	IUUC-Ath-006867

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEAPRATEAA PIPFSDNVPP ASPRISQADF QKREPSNMVA GLGPSMKKAD LSLQIPPRHA 60
GIGTGRKYSP RSPGPTGGFL RALSFKKKVA SSDGERSSLL SSDHKVVPGS PLAANFFSCN 120

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Nucleotide Sequence
(Fasta)

CAAGAACACC CCGACCACTC TGTCACTCTC AGTCGATTTC TCCTCAGTTT CCTCCGTCCC 60
TCATTTGGGG GTCTCTCAAT TTAAAAATTA ATCCTTAATC CTTTATATAT ATATATGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

sot:102592492

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005565	Arabidopsis lyrata	51.19	2.00e-106	378.00
IUUC-Ath-006867	Arabidopsis thaliana	52.02	5.00e-102	363.00
IUUC-Bol-015615	Brassica oleracea	50.00	7.00e-102	362.00
IUUC-Bra-017184	Brassica rapa	49.77	1.00e-103	368.00
IUUC-Gma-043613	Glycine max	56.55	1.00e-124	438.00
IUUC-Mtr-058058	Medicago truncatula	55.03	1.00e-116	411.00
IUUC-Mac-065242	Musa acuminata	50.29	9.00e-91	325.00
IUUC-Olu-087883	Ostreococcus lucimarinus	29.41	2.00e-11	61.60
IUUC-Pop-099515	Populus trichocarpa	60.61	2.00e-140	490.00
IUUC-Ppe-101242	Prunus persica	61.21	6.00e-116	409.00
IUUC-Sly-111220	Solanum lycopersicum	93.21	0.00e+00	633.00
IUUC-Tca-121528	Theobroma cacao	57.18	3.00e-121	427.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence