iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121528

Ensembl Protein ID

EOY06365

UniProt Accession

A0A061EMU5; A0A061EMU5_THECC

Genbank Protein ID

EOY06365.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001882

Gene Name

TCM_021113

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_021113	EOY06365	EOY06365

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	58.31	5.00e-104	375.00	IUUC-Ath-006867

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MQATEAEALS NGVSKGSSQA KSPILEPSDS EVSKPGTSGR RLDLSLQIPP RPLGFGSRSG 60
KGLLQSLGSG KGTSSSGGFL RGLSFKKKGV VADGEGSSLL TPDSKTGPES SNMASFPSPF 120

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Nucleotide Sequence
(Fasta)

CTGTAGAAAA AGCGAACAAA GACGACATGA CAAAGCGGCA AGGAAACGGA AAGAGGGACG 60
GTCCTTCTTT CAGACAAGAG TTTCTCGTCA TCTTCCCAAG TCAGTCCGAC CAGACCACAC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR033275--MARCH-like
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51292--ZF_RING_CH

Pfam

PF12906--RINGv

SMART

SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005565	Arabidopsis lyrata	56.17	4.00e-114	404.00
IUUC-Ath-006867	Arabidopsis thaliana	60.36	4.00e-113	400.00
IUUC-Bol-015615	Brassica oleracea	58.10	3.00e-115	407.00
IUUC-Bra-017184	Brassica rapa	56.84	5.00e-115	407.00
IUUC-Gma-043613	Glycine max	64.17	2.00e-136	478.00
IUUC-Mtr-058058	Medicago truncatula	59.95	3.00e-124	437.00
IUUC-Mac-065242	Musa acuminata	55.27	3.00e-97	348.00
IUUC-Olu-087883	Ostreococcus lucimarinus	26.99	6.00e-11	60.10
IUUC-Pop-099515	Populus trichocarpa	71.83	1.00e-157	548.00
IUUC-Ppe-101242	Prunus persica	70.45	4.00e-129	453.00
IUUC-Sly-111220	Solanum lycopersicum	57.04	2.00e-96	345.00
IUUC-Stu-112321	Solanum tuberosum	58.33	1.00e-109	389.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence