iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005552

UUCD1 version

UUC-ArL-00727

Ensembl Protein ID

fgenesh1_pg.C_scaffold_3000136

UniProt Accession

D7KZF4; D7KZF4_ARALL

Genbank Protein ID

EFH58478.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348715

Gene Name

ARALYDRAFT_340373

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_3000136	fgenesh1_pg.C_scaffold_3000136	fgenesh1_pg.C_scaffold_3000136

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.30e-08	34.0	181	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cle++  +++ +v+ C H+fh++C++ w        ++ +CP+C
   Q: 181  CPTCLEEYtsENPKIVTKCSHHFHLSCIYEW------MERSENCPVC 221
           ********8777556799*************......999999**** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGCVSSCFRV EDIDDYMNPN SSVYRNCPCI RCLAHNFLNL YISVFRRGET RSLPSSVQAT 60
ASITSSSSHD NFLSEAFRST PRPLPYDADP RYFRSLVSRR EKGSSHSHEE VEPLRSDSDA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGATGTG TTTCTTCTTG CTTCCGGGTC GAAGACATTG ATGACTACAT GAATCCTAAT 60
AGCTCTGTCT ATAGGAACTG TCCCTGCATA AGATGCCTTG CTCATAATTT CCTTAACCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_340373

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006602	Arabidopsis thaliana	97.80	2.00e-108	384.00
IUUC-Bol-016572	Brassica oleracea	85.04	1.00e-100	358.00
IUUC-Bra-017888	Brassica rapa	85.46	3.00e-97	347.00
IUUC-Cre-022854	Chlamydomonas reinhardtii	59.26	1.00e-17	80.10
IUUC-Obr-076662	Oryza brachyantha	43.39	8.00e-44	169.00
IUUC-Ogl-076952	Oryza glaberrima	43.39	2.00e-46	178.00
IUUC-Oin-079155	Oryza indica	43.39	2.00e-46	178.00
IUUC-Osa-085985	Oryza sativa	43.39	2.00e-46	178.00
IUUC-Smo-109167	Selaginella moellendorffii	65.00	3.00e-20	88.60
IUUC-Sit-109989	Setaria italica	43.39	1.00e-45	175.00
IUUC-Sly-111198	Solanum lycopersicum	58.47	9.00e-65	238.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence