iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005722

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348713

Gene Name

ARALYDRAFT_892182

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_104976.1	scaffold_104976.1	scaffold_104976.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-09	37.4	77	119

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+++d     ++  CgHvfh+ C+  w        +e +CP Cr
   Q: 77   CPICLEEYEDDhqiRRLKKCGHVFHLLCIDSW------LTRERSCPSCR 119
           ********77433223455*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDTTDEIIIG LFIISLIVTV IAHCCENTSL PPTGLPPETI HQTVKPQQDI ETGQRKTLVF 60
KDIKEGGEEE GSGKRFCPIC LEEYEDDHQI RRLKKCGHVF HLLCIDSWLT RERSCPSCRR 120

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Nucleotide Sequence
(Fasta)

GAAAACGAAG TATACGTGAG GATGGATACT ACTGATGAAA TTATCATTGG TTTGTTCATC 60
ATCTCCTTGA TCGTCACCGT AATTGCTCAC TGTTGCGAAA ATACAAGTCT CCCTCCCACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_892182

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007077	Arabidopsis thaliana	73.64	2.00e-49	186.00
IUUC-Bol-016278	Brassica oleracea	59.52	1.00e-36	144.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence