iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017828

Ensembl Protein ID

Bra037092.1-P

UniProt Accession

M4F7N1; M4F7N1_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra037092	Bra037092.1	Bra037092.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-23	84.1	429	494

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqa 67
           +p+ f CpI+ e+M+dP+ +++G ty++++I+kw+++g++t+P+t+ +l +++lvPn +lr+ iq+
   Q: 429  PPPSFYCPITQEVMKDPHFAADGFTYEAEAIKKWFSTGHETSPMTNLQLPHRNLVPNRALRSAIQD 494
           799*************************************************************96 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSKMNSQTSY GVVGNPNEEK RVIEKARSLL NWLTERNFDK IKDEIVQTII RASPSAFVIK 60
SLVCFILDMA MVDSTANVLF ARLSVHLFQS LPPFPSADRH GEITTFERLF LCKCRMELEH 120

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Nucleotide Sequence
(Fasta)

ATGTCGAAGA TGAACTCTCA GACTTCGTAT GGAGTTGTAG GGAATCCCAA CGAGGAGAAA 60
CGAGTTATAG AAAAAGCAAG GAGGTAATTA CACTGCCTCA CCTTTCCATT TCATTATTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR016024--ARM-type_fold
IPR016021--MIF4-like
IPR003890--MIF4G-like_typ-3
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF02854--MIF4G
PF04564--U-box

SMART

SM00543--MIF4G
SM00504--Ubox

Gene Ontology

GO:0003723--F:RNA binding
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006502	Arabidopsis lyrata	66.14	3.00e-162	564.00
IUUC-Ath-007386	Arabidopsis thaliana	64.32	7.00e-154	536.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence