iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099362

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

TRANSPORT INHIBITOR RESPONSE 1 family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTR_0014s12930g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s12930	POPTR_0014s12930.1	POPTR_0014s12930.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	79.38	0.00e+00	952.00	IUUC-Ath-007305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLRKANSFPE EVLQHVLSFI TNDKDRNAVS LVCKSWYEIE RWCRKRIFVG NCYAVRPEMV 60
IRRFPELRSV ELKGKPHFAD FSLVPDGWGG CVYPWIAALA TAYPWLEEIR LKRMVVSDES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCATCCAGT CACTCTTAAA AAAAATCCAA AACTCACTCA CTCTGCTGTC TCTGCAAATC 60
TCACTCGGCA GCGTTTGCTT AGGCTTTGAT AATGTTGAGA AAGGCGAATT CGTTCCCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX
SM00367--LRR_CC

Gene Ontology

GO:0000822--F:inositol hexakisphosphate binding
GO:0009734--P:auxin-activated signaling pathway

KEGG

pop:POPTR_0014s12930g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006112	Arabidopsis lyrata	79.35	0.00e+00	950.00
IUUC-Ath-007305	Arabidopsis thaliana	79.38	0.00e+00	952.00
IUUC-Bol-016359	Brassica oleracea	75.56	0.00e+00	899.00
IUUC-Bra-016902	Brassica rapa	79.07	0.00e+00	939.00
IUUC-Gma-044228	Glycine max	79.55	0.00e+00	927.00
IUUC-Mtr-057747	Medicago truncatula	80.45	0.00e+00	944.00
IUUC-Mac-064464	Musa acuminata	66.90	0.00e+00	771.00
IUUC-Ppe-101435	Prunus persica	80.65	0.00e+00	978.00
IUUC-Ssl-108660	Sclerotinia sclerotiorum	22.14	7.30e-02	31.20
IUUC-Sit-110658	Setaria italica	63.60	0.00e+00	665.00
IUUC-Sly-111582	Solanum lycopersicum	78.09	0.00e+00	919.00
IUUC-Stu-112711	Solanum tuberosum	77.76	0.00e+00	926.00
IUUC-Tca-121407	Theobroma cacao	81.51	0.00e+00	961.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence