iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016677

Ensembl Protein ID

Bra015801.1-P

UniProt Accession

M4DH24; M4DH24_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra015801	Bra015801.1	Bra015801.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/SKP1	1.20e-29	103.2	112	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/SKP1

   S: 1    ksLLdltcktVadmikgktpeeiRktFnienDftpeEeakvReEnqWA 48
           k+LLdltc+tV dmikgktp+eiR+tFni+nDf+peEe++vR+EnqWA
   Q: 112  KNLLDLTCQTVPDMIKGKTPDEIRTTFNIKNDFSPEEEEEVRRENQWA 159
           79*********************************************9 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSTKKIVLKS SDAESFEVDE AVARESQTLA HMVEDDCTDN GIPLPNVTGK ILAKVIEYCK 60
KHVDAAAAKT EATADGGAPS DEDLKAWDAE FMNIDQATLF ELILAANYLN IKNLLDLTCQ 120

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Nucleotide Sequence
(Fasta)

ATGTCGACGA AGAAGATTGT GTTGAAGAGC TCCGACGCCG AGTCTTTCGA GGTTGACGAG 60
GCCGTGGCTC GCGAGTCTCA GACCCTAGCT CACATGGTCG AAGACGACTG CACCGACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016897--SKP1
IPR001232--SKP1-like
IPR011333--SKP1/BTB/POZ
IPR016072--Skp1_comp_dimer
IPR016073--Skp1_comp_POZ

Pfam

PF01466--Skp1
PF03931--Skp1_POZ

SMART

SM00512--Skp1

Gene Ontology

GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence