iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044288

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000837

Gene Name

LOC100775453; GLYMA_04G104200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G11330	GLYMA04G11330.1	GLYMA04G11330.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-06	30.2	318	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d  +l++G+ D+t+++WD+r
   Q: 318  GHLDYSFSSAWhPDgQILATGNQDKTCRLWDIR 350
           89999*******99999**************87 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEHFNNDDLE YVVDEYYDVP DFAVEDTSSD IVPELTSDVD SDFEDEFPTS NAKTDTTASE 60
ARNGKDIQGI PWERLNYSRD KYRETRLKQY KNYQNFSRSR HDLRKECLEV QKGETFYDFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAACCTCCTT CTTCCTACTT CCTTCTCCTT CCCCAGCTCC CTCTATAAGT ACATCACCAC 60
CACCCATTCT CTGTCTCTGC ACTTTTCTTT TCTTTTCGCT AACCCTTTCC TCTCAACCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

gmx:100775453

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	58.71	4.00e-152	531.00
IUUC-Atr-002734	Amborella trichopoda	72.07	0.00e+00	674.00
IUUC-Aly-005521	Arabidopsis lyrata	69.11	0.00e+00	645.00
IUUC-Ath-007611	Arabidopsis thaliana	69.33	0.00e+00	647.00
IUUC-Bol-015183	Brassica oleracea	70.51	0.00e+00	664.00
IUUC-Bra-017403	Brassica rapa	70.29	0.00e+00	659.00
IUUC-Cme-027214	Cyanidioschyzon merolae	39.80	8.00e-53	202.00
IUUC-Hvu-047809	Hordeum vulgare	65.57	3.00e-158	551.00
IUUC-Lpe-051582	Leersia perrieri	67.34	9.00e-166	576.00
IUUC-Mtr-058564	Medicago truncatula	85.43	0.00e+00	717.00
IUUC-Mac-065012	Musa acuminata	62.56	5.00e-164	571.00
IUUC-Obr-076093	Oryza brachyantha	67.09	7.00e-164	570.00
IUUC-Ogu-078133	Oryza glumaepatula	66.58	8.00e-163	566.00
IUUC-Oin-079185	Oryza indica	64.35	2.00e-159	555.00
IUUC-Olo-080502	Oryza longistaminata	56.82	1.00e-139	489.00
IUUC-Oni-082850	Oryza nivara	66.34	5.00e-162	563.00
IUUC-Osa-085692	Oryza sativa	57.93	2.00e-142	499.00
IUUC-Pop-099735	Populus trichocarpa	83.12	7.00e-157	546.00
IUUC-Smo-109252	Selaginella moellendorffii	64.75	7.00e-164	570.00
IUUC-Sit-110668	Setaria italica	66.14	3.00e-157	547.00
IUUC-Sly-111186	Solanum lycopersicum	73.37	0.00e+00	648.00
IUUC-Stu-111950	Solanum tuberosum	72.23	0.00e+00	656.00
IUUC-Sbi-113990	Sorghum bicolor	63.90	2.00e-162	565.00
IUUC-Tca-121603	Theobroma cacao	68.21	0.00e+00	638.00
IUUC-Tae-123203	Triticum aestivum	61.50	3.00e-159	554.00
IUUC-Tur-126710	Triticum urartu	53.97	9.00e-144	503.00
IUUC-Vvi-131311	Vitis vinifera	78.00	0.00e+00	733.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence