iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099735

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTR_0005s16680g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s16680	POPTR_0005s16680.1	POPTR_0005s16680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-07	30.5	185	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d  +l++G+ D t+++WD+r
   Q: 185  GHLDYSFSSAWhPDgLILATGNQDTTCRLWDIR 217
           89999*******997778*************87 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MLRNLLWATS KHDVYLMQNY SAMHWSSLLR RGKEVLNVAK PVAPTRQSPG LLSQSLSRVQ 60
ISTMAVKENL MVAGGFQGEL ICKCLDQPGV AFCSKITTGE NAITNAVDVY RNHNGSMRIM 120

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Nucleotide Sequence
(Fasta)

GTTTCTTTCT TACAACAAAC AGAAACCGTT TTATTTGTTT CTTTACTAAG CTAAAAACAC 60
TCACACCTCT CTGTCTAGGA ATCCCAAATC TAACGCCATC TTTTTCTCAA GATTCTTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0005s16680g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007672	Arabidopsis thaliana	73.89	3.00e-146	511.00
IUUC-Bdi-015063	Brachypodium distachyon	71.02	8.00e-132	462.00
IUUC-Bol-015183	Brassica oleracea	76.11	2.00e-146	511.00
IUUC-Cme-027214	Cyanidioschyzon merolae	39.94	1.00e-50	194.00
IUUC-Gma-044288	Glycine max	83.12	7.00e-157	546.00
IUUC-Mtr-058564	Medicago truncatula	81.47	1.00e-152	532.00
IUUC-Tca-121603	Theobroma cacao	86.35	3.00e-165	574.00
IUUC-Yli-134594	Yarrowia lipolytica	32.37	1.00e-38	153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence