iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__2557__AT1G23410.1	fgenesh2_kg.1__2557__AT1G23410.1	fgenesh2_kg.1__2557__AT1G23410.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	2.20e-41	140.6	1	76
ULD/UDP/UBQ/UBQ_PIM	6.50e-28	97.2	1	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdti+++k+++++keGiPP+qqrli+aGkqled++t+adyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+ ++K+ki+++ g+pp+qq+LI+aGk+L+D +tL +++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 73
           99********************************************************************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MQIFVKTLTG KTITLEVESS DTIDNVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLADYN 60
IQKESTLHLV LRLRGGAKKR KKKTYTKPKK IKHKHKKVKL AVLQFYKVDG SGKVQRLRKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACAAGAAA ATGCAGATCT TCGTGAAAAC CCTAACGGGG AAGACAATAA CCCTAGAGGT 60
TGAATCATCA GACACAATCG ACAATGTGAA AGCGAAGATT CAAGACAAAG AAGGAATCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01402--Ribosomal_S27
SM00213--UBQ

Gene Ontology

GO:0022627--C:cytosolic small ribosomal subunit
GO:0005794--C:Golgi apparatus
GO:0005886--C:plasma membrane
GO:0009506--C:plasmodesma
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

aly:ARALYDRAFT_472603

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007158	Arabidopsis thaliana	98.72	1.00e-73	267.00
IUUC-Bol-016477	Brassica oleracea	99.36	2.00e-73	266.00
IUUC-Cgl-026423	Colletotrichum gloeosporioides	76.62	6.00e-50	189.00
IUUC-Eeu-035081	Erinaceus europaeus	94.29	3.00e-33	132.00
IUUC-Mvi-060484	Microbotryum violaceum	82.78	8.00e-60	222.00
IUUC-Oga-089160	Otolemur garnettii	71.79	5.00e-54	202.00
IUUC-Pma-094647	Petromyzon marinus	78.69	2.00e-35	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence