iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016934

Ensembl Protein ID

Bra012824.1-P

UniProt Accession

M4D8L4; M4D8L4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012824	Bra012824.1	Bra012824.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-14	53.8	162	189

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikv 27
           +H +++tcl++sd  l++sGs  g + v
   Q: 162  THGGPITCLSLSDnQLFLSGSSLGRVTV 189
           59*********77699*****9988876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MHQVGSTSLE QPREIDVEDF AMKHHKMALL RGRIEIERWE AHSHRFSQCR MKKGLLLTGV 60
GDKVMRLWSL NSYKCMEEYS LPDAASLVDF DFDESKIVGL VGTRISIWRR NGQRSIFPSR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACCAGG TCGGCTCCAC GTCGCTGGAG CAGCCACGCG AGATAGACGT GGAGGATTTC 60
GCGATGAAGC ATCACAAGAT GGCGTTGCTA AGAGGTCGAA TCGAGATTGA GCGGTGGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	51.52	4.00e-83	301.00
IUUC-Aly-005690	Arabidopsis lyrata	84.72	2.00e-179	621.00
IUUC-Ath-006699	Arabidopsis thaliana	81.74	5.00e-175	606.00
IUUC-Bdi-014108	Brachypodium distachyon	45.10	8.00e-89	320.00
IUUC-Bol-015377	Brassica oleracea	97.65	0.00e+00	689.00
IUUC-Gma-043394	Glycine max	54.68	2.00e-108	385.00
IUUC-Lpe-051613	Leersia perrieri	42.72	3.00e-80	291.00
IUUC-Mtr-057690	Medicago truncatula	54.91	4.00e-110	391.00
IUUC-Mac-064938	Musa acuminata	51.03	3.00e-89	321.00
IUUC-Oba-075418	Oryza barthii	45.51	5.00e-90	323.00
IUUC-Obr-076882	Oryza brachyantha	45.99	1.00e-90	326.00
IUUC-Ogl-077438	Oryza glaberrima	45.51	3.00e-90	325.00
IUUC-Ogu-078943	Oryza glumaepatula	45.82	2.00e-90	325.00
IUUC-Oin-079069	Oryza indica	45.51	6.00e-90	324.00
IUUC-Olo-080409	Oryza longistaminata	39.70	6.00e-73	267.00
IUUC-Oni-083056	Oryza nivara	45.20	6.00e-89	320.00
IUUC-Opu-084172	Oryza punctata	47.53	5.00e-93	334.00
IUUC-Oru-085030	Oryza rufipogon	45.51	6.00e-90	324.00
IUUC-Osa-085520	Oryza sativa	45.51	6.00e-90	324.00
IUUC-Ppa-095450	Physcomitrella patens	29.18	4.00e-36	145.00
IUUC-Pop-099796	Populus trichocarpa	59.59	7.00e-120	423.00
IUUC-Ppe-101252	Prunus persica	58.02	6.00e-106	377.00
IUUC-Smo-108718	Selaginella moellendorffii	34.27	9.00e-31	127.00
IUUC-Sit-109830	Setaria italica	45.82	8.00e-92	330.00
IUUC-Sly-111786	Solanum lycopersicum	57.32	2.00e-100	358.00
IUUC-Sbi-114102	Sorghum bicolor	47.68	4.00e-93	334.00
IUUC-Tca-121562	Theobroma cacao	61.79	6.00e-115	407.00
IUUC-Tae-124289	Triticum aestivum	46.59	2.00e-91	328.00
IUUC-Tur-126707	Triticum urartu	39.84	3.00e-65	242.00
IUUC-Vvi-131441	Vitis vinifera	61.33	3.00e-121	427.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence