iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015441

Ensembl Protein ID

Bo7g104940.1

UniProt Accession

A0A0D3DEJ6; A0A0D3DEJ6_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo7g104940	Bo7g104940.1	Bo7g104940.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-34	116.7	102	137
UBD/Beta-Prp	1.30e-46	160.6	97	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH dsv c++f +d t l+sGsdD t+++WDl t++
   Q: 102  GHRDSVLCVSFsPDgTQLASGSDDTTVRLWDLYTQT 137
           8***********999****************98876 PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvn 141
            +s+ gh + v +v+fspdg  l++gs+D t+++wdl t +++ t  gh++ vls+++sp+g++lvsG+    i +w  +tg+   ++l+gh+++++
   Q: 97   SASIPGHRDSVLCVSFSPDGTQLASGSDDTTVRLWDLYTQTPMFTCIGHTNWVLSVAWSPDGKHLVSGDLAGNICCWIPKTGKLDGSPLRGHKKWIT 193
           567789***********************************************************************9999999999********** PP
   S: 142  cvvvhpdg.nl....lvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq.tgec..vrtlnghtdnvksvrf 230
           ++++ p    +    +v++s+D+  r+Wd+  +k ++ l+g ht+ v+++++  +g  + +gs+d t+k+w++  +g      +l+ h  +v+s+++
   Q: 194  SISWEPVHlTYpcrrFVTSSKDEDARIWDITLKKSVTCLSG-HTRGVTCVKWGGDG-IIYTGSQDCTIKMWQVTpEGLPclKAQLKKHGHWVNSLAL 288
           ****997554433339************************9.************98.9***************98443333556789*********9 PP
   S: 231  spnderlvsgssD 243
           s  d  l +g+ D
   Q: 289  S-TDYVLRTGAFD 300
           9.55555555555 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MELAMTVMCR LVDAEGIPLG DPMYIPQRAG KLQLTELANK FLNNEEKLRY AFYVSGEELR 60
VPLGTYIEER SVSMEEILTI VYRQEAVFRT RPVSRISASI PGHRDSVLCV SFSPDGTQLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTAG CGATGACCGT GATGTGTCGG TTAGTAGACG CCGAAGGAAT TCCTTTAGGT 60
GACCCTATGT ATATCCCTCA GCGAGCAGGG AAGTTGCAGC TTACCGAGCT AGCTAATAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR012972--NLE
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0042254--P:ribosome biogenesis

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence