iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121596

Ensembl Protein ID

EOY28800

UniProt Accession

A0A061GG10; A0A061GG10_THECC

Genbank Protein ID

EOY28800.1

Protein Name

PHD finger family protein / bromo-adjacent domain-containing protein isoform 1

Genbank Nucleotide ID

CM001884

Gene Name

TCM_030300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_030300	EOY28802	EOY28802
TCM_030300	EOY28801	EOY28801
TCM_030300	EOY28800	EOY28800

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.00e-09	36.5	149	197

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +v+Ce C++w+HpaC+++++ee ++ ++ + C++C++
   Q: 149  YC-KCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH-FVCSECSE 197
           78.7*****************************888888887.******75 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MAKTRPGLSA TKPKPGKKDL DSYTIRGTNK VVRAGDCVLM RPSDTGKPPY VAQIEKIEVD 60
SRNNVKVRVR WYYRPEESLG GRRQFHGVKE LFLSDHYDVQ SAHTIEGKCI VHSFKNYTKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTGCTCTC TCCCATGAGG GGAACTTAGG GTTTGGTTTG TCTCTCTTTC TCCCCTTAAT 60
TCTTCAAAAG CTTCTTCTTT TTCACCATTT TGAAGGAAAA GAGTCTGCAA CTTTTTCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005717	Arabidopsis lyrata	88.02	2.00e-115	407.00
IUUC-Ath-007631	Arabidopsis thaliana	87.56	1.00e-114	404.00
IUUC-Bgr-012210	Blumeria graminis	48.21	3.00e-09	55.80
IUUC-Bol-016238	Brassica oleracea	87.56	4.00e-114	402.00
IUUC-Bra-017570	Brassica rapa	86.64	5.00e-113	399.00
IUUC-Lma-053190	Leptosphaeria maculans	33.33	4.00e-05	43.90
IUUC-Pan-092346	Papio anubis	42.37	8.00e-12	65.10
IUUC-Pop-099322	Populus trichocarpa	88.48	4.00e-115	405.00
IUUC-Ppe-101639	Prunus persica	85.85	6.00e-110	389.00
IUUC-Sre-115140	Sporisorium reilianum	51.02	3.00e-09	57.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence