iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129833

Ensembl Protein ID

EGY17791

UniProt Accession

G2WUK0; G2WUK0_VERDV

Genbank Protein ID

EGY17791.1

Protein Name

Periodic tryptophan protein

Genbank Nucleotide ID

DS572696

Gene Name

VDAG_01473

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_01473	EGY17791	EGY17791

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-32	108.8	348	385
UBD/Beta-Prp	1.40e-69	233.6	261	456

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH ds+++l + +d  ++v+ +dDg+ikvWD+ +g ++
   Q: 348  GHFDSMNSLVYsPDgQRIVTIADDGKIKVWDVESGFCI 385
           899******99*999*****************999876 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsG.shdrtirvwdletgqcleetlsghdgvvncvvvhp 147
           + +++a v++  f+p++++lv g + ++  ++++ ++ ++htl+  ++++  +++++sg++l+ G s+   + vw++++++ +   ++gh ++ n++v++p
   Q: 261  FHQNDANVRCAAFHPESNLLVAGFSNGIFGLYEMPDFNQIHTLNISQNEIDFVTINKSGEWLAFGaSKLGQLLVWEWQSESYIL-KQQGHFDSMNSLVYSP 360
           456677788888888888888888888888888888888888887777888888888887777764667777778888777777.7788888888888888 PP
   S: 148  dgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.dnvksvrfspnderlvsgssD 243
           dg+ +v+ ++D+++++Wd+++g+++ t+t+ ht+ v+  +f ++g+ l ++sldg+++ wdl + +  rt+++ t   +++++++p +e ++ gs D
   Q: 361  DGQRIVTIADDGKIKVWDVESGFCIVTFTE-HTSGVTACEFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTrLSFSCMAVDPSGEVVAAGSLD 456
           888888888888888888888888888877.888888888888888888888888888888887777888887552567777777777777777766 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MSFSNLLGTV YCQGNLLYSP DGTQLFSPVG NRVTVFDLVN NKSHTLPFAH RKNIARIGLT 60
PRGNLLLSVD EDGHAILTNV QRRIATYHFS FRGKVTALAF APSGRHFAVG LGRKIEVWHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAGTGA AGCGGCGCCC AGGCAATCAT GAATACCGAC TTTAAGGCAA GACCTCGCCC 60
CTTTACTTTG AGACTCACCT CTGACTGATT GACCGCGACA GTTCTCCAAC TTGCTCGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR027145--PWP2
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000920--P:cell separation after cytokinesis
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0030010--P:establishment of cell polarity

KEGG

vda:VDAG_01473

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001932	Ailuropoda melanoleuca	42.82	0.00e+00	713.00
IUUC-Atr-003033	Amborella trichopoda	39.97	4.00e-140	490.00
IUUC-Apl-003219	Anas platyrhynchos	41.32	0.00e+00	693.00
IUUC-Aca-004950	Anolis carolinensis	42.40	0.00e+00	713.00
IUUC-Aly-006213	Arabidopsis lyrata	37.31	1.00e-170	591.00
IUUC-Ath-006593	Arabidopsis thaliana	36.66	2.00e-170	591.00
IUUC-Ago-007916	Ashbya gossypii	50.24	0.00e+00	858.00
IUUC-Acl-008225	Aspergillus clavatus	62.76	0.00e+00	1128.00
IUUC-Afl-008390	Aspergillus flavus	59.83	0.00e+00	1117.00
IUUC-Afu-009039	Aspergillus fumigatus	60.13	0.00e+00	1115.00
IUUC-Ani-009228	Aspergillus nidulans	57.28	0.00e+00	994.00
IUUC-Ang-009663	Aspergillus niger	60.83	0.00e+00	1097.00
IUUC-Aor-009923	Aspergillus oryzae	59.83	0.00e+00	1117.00
IUUC-Ate-010264	Aspergillus terreus	63.04	0.00e+00	1129.00
IUUC-Ame-010790	Astyanax mexicanus	41.01	2.00e-44	171.00
IUUC-Bgr-012066	Blumeria graminis	66.67	0.00e+00	1226.00
IUUC-Bta-012399	Bos taurus	42.60	0.00e+00	683.00
IUUC-Bci-013757	Botrytis cinerea	69.96	0.00e+00	1261.00
IUUC-Bdi-015028	Brachypodium distachyon	39.22	2.00e-176	610.00
IUUC-Bol-016521	Brassica oleracea	38.57	5.00e-173	599.00
IUUC-Bra-017096	Brassica rapa	38.35	8.00e-174	602.00
IUUC-Cel-018690	Caenorhabditis elegans	31.91	5.00e-133	466.00
IUUC-Cja-019229	Callithrix jacchus	41.34	0.00e+00	688.00
IUUC-Cfa-020504	Canis familiaris	42.66	0.00e+00	702.00
IUUC-Cpo-021574	Cavia porcellus	41.98	0.00e+00	711.00
IUUC-Cre-022756	Chlamydomonas reinhardtii	50.14	8.00e-114	403.00
IUUC-Csa-023436	Chlorocebus sabaeus	41.59	0.00e+00	685.00
IUUC-Cin-025397	Ciona intestinalis	39.74	6.00e-145	506.00
IUUC-Csv-026194	Ciona savignyi	44.73	2.00e-124	438.00
IUUC-Cgl-026684	Colletotrichum gloeosporioides	79.91	0.00e+00	1425.00
IUUC-Cne-027031	Cryptococcus neoformans	46.71	0.00e+00	839.00
IUUC-Cme-027276	Cyanidioschyzon merolae	32.09	2.00e-71	262.00
IUUC-Dre-027514	Danio rerio	39.53	0.00e+00	658.00
IUUC-Dno-029191	Dasypus novemcinctus	41.30	2.00e-168	584.00
IUUC-Dor-030149	Dipodomys ordii	42.12	0.00e+00	712.00
IUUC-Dse-031260	Dothistroma septosporum	63.27	0.00e+00	718.00
IUUC-Dme-032043	Drosophila melanogaster	37.76	6.00e-176	609.00
IUUC-Ete-033102	Echinops telfairi	47.61	8.00e-140	489.00
IUUC-Eca-033223	Equus caballus	43.13	0.00e+00	714.00
IUUC-Fca-035795	Felis catus	41.64	0.00e+00	666.00
IUUC-Fal-036830	Ficedula albicollis	40.62	0.00e+00	682.00
IUUC-Fox-037835	Fusarium oxysporum	78.33	0.00e+00	1394.00
IUUC-Fso-038324	Fusarium solani	78.88	0.00e+00	1383.00
IUUC-Gmo-039355	Gadus morhua	40.96	0.00e+00	685.00
IUUC-Ggr-039840	Gaeumannomyces graminis	73.82	0.00e+00	1303.00
IUUC-Gga-040907	Gallus gallus	45.52	1.00e-138	484.00
IUUC-Gac-042624	Gasterosteus aculeatus	41.19	0.00e+00	669.00
IUUC-Gma-043034	Glycine max	37.99	5.00e-179	619.00
IUUC-Hsa-046145	Homo sapiens	41.82	0.00e+00	707.00
IUUC-Hvu-047416	Hordeum vulgare	38.99	7.00e-178	615.00
IUUC-Itr-049083	Ictidomys tridecemlineatus	41.93	0.00e+00	706.00
IUUC-Kpa-049150	Komagataella pastoris	48.72	0.00e+00	838.00
IUUC-Lch-049460	Latimeria chalumnae	40.14	8.00e-167	579.00
IUUC-Lpe-050840	Leersia perrieri	42.29	2.00e-144	504.00
IUUC-Loc-052733	Lepisosteus oculatus	42.09	0.00e+00	697.00
IUUC-Lma-053277	Leptosphaeria maculans	63.79	0.00e+00	1143.00
IUUC-Laf-054294	Loxodonta africana	42.23	0.00e+00	679.00
IUUC-Mcc-054624	Macaca mulatta	41.70	0.00e+00	706.00
IUUC-Meu-056665	Macropus eugenii	43.49	1.00e-82	298.00
IUUC-Mor-057288	Magnaporthe oryzae	74.23	0.00e+00	1328.00
IUUC-Mpo-057594	Magnaporthe poae	73.85	0.00e+00	1308.00
IUUC-Mtr-058700	Medicago truncatula	39.57	0.00e+00	637.00
IUUC-Mla-058846	Melampsora laricipopulina	47.21	0.00e+00	799.00
IUUC-Mga-059207	Meleagris gallopavo	38.22	8.00e-173	598.00
IUUC-Mvi-060327	Microbotryum violaceum	47.99	0.00e+00	832.00
IUUC-Mmr-061264	Microcebus murinus	42.14	0.00e+00	676.00
IUUC-Mdo-062327	Monodelphis domestica	42.84	0.00e+00	714.00
IUUC-Mmu-063542	Mus musculus	42.16	0.00e+00	686.00
IUUC-Mac-065142	Musa acuminata	38.65	2.00e-176	611.00
IUUC-Mpu-066098	Mustela putorius furo	41.66	1.00e-170	591.00
IUUC-Mlu-067056	Myotis lucifugus	38.15	1.00e-168	585.00
IUUC-Nfi-068323	Neosartorya fischeri	60.11	0.00e+00	1117.00
IUUC-Ncr-068925	Neurospora crassa	74.84	0.00e+00	1388.00
IUUC-Nle-068970	Nomascus leucogenys	41.64	0.00e+00	701.00
IUUC-Opr-070966	Ochotona princeps	54.94	2.00e-107	381.00
IUUC-Ont-071252	Oreochromis niloticus	41.13	0.00e+00	677.00
IUUC-Oan-072737	Ornithorhynchus anatinus	40.38	0.00e+00	671.00
IUUC-Oba-075794	Oryza barthii	37.09	2.00e-166	577.00
IUUC-Obr-076617	Oryza brachyantha	39.03	6.00e-177	612.00
IUUC-Ogl-077022	Oryza glaberrima	38.46	1.00e-177	614.00
IUUC-Ogu-078757	Oryza glumaepatula	34.97	6.00e-80	290.00
IUUC-Oin-079813	Oryza indica	38.57	3.00e-177	613.00
IUUC-Olo-080265	Oryza longistaminata	38.69	7.00e-178	615.00
IUUC-Ome-081494	Oryza meridionalis	38.46	5.00e-176	609.00
IUUC-Oni-082639	Oryza nivara	34.97	8.00e-80	290.00
IUUC-Opu-084005	Oryza punctata	38.69	2.00e-178	617.00
IUUC-Oru-084883	Oryza rufipogon	34.97	6.00e-80	290.00
IUUC-Osa-086158	Oryza sativa	38.57	5.00e-177	612.00
IUUC-Ola-086822	Oryzias latipes	41.16	0.00e+00	679.00
IUUC-Olu-087741	Ostreococcus lucimarinus	29.32	3.00e-21	92.00
IUUC-Oga-088887	Otolemur garnettii	42.32	0.00e+00	682.00
IUUC-Oar-090110	Ovis aries	41.79	0.00e+00	647.00
IUUC-Pan-092808	Papio anubis	42.28	0.00e+00	712.00
IUUC-Psi-093954	Pelodiscus sinensis	42.12	0.00e+00	707.00
IUUC-Pno-094922	Phaeosphaeria nodorum	64.43	0.00e+00	1173.00
IUUC-Ppa-095678	Physcomitrella patens	40.18	2.00e-177	614.00
IUUC-Pfo-097175	Poecilia formosa	41.84	0.00e+00	700.00
IUUC-Pab-098155	Pongo abelii	42.08	0.00e+00	707.00
IUUC-Pop-099635	Populus trichocarpa	38.38	0.00e+00	637.00
IUUC-Pca-100947	Procavia capensis	38.72	0.00e+00	627.00
IUUC-Ppe-101552	Prunus persica	39.29	0.00e+00	646.00
IUUC-Pva-102744	Pteropus vampyrus	38.57	2.00e-168	584.00
IUUC-Pgr-103389	Puccinia graminis	46.44	0.00e+00	784.00
IUUC-Ptt-103953	Puccinia triticina	40.18	6.00e-179	619.00
IUUC-Pte-104079	Pyrenophora teres	66.24	0.00e+00	1166.00
IUUC-Pyt-104656	Pyrenophora triticirepentis	66.51	0.00e+00	1164.00
IUUC-Rno-105502	Rattus norvegicus	42.40	0.00e+00	711.00
IUUC-Sce-106390	Saccharomyces cerevisiae	50.47	0.00e+00	902.00
IUUC-Sha-107264	Sarcophilus harrisii	37.66	4.00e-76	276.00
IUUC-Sja-107674	Schizosaccharomyces japonicus	50.46	0.00e+00	909.00
IUUC-Spo-108348	Schizosaccharomyces pombe	49.47	0.00e+00	867.00
IUUC-Smo-109327	Selaginella moellendorffii	38.56	1.00e-180	624.00
IUUC-Sit-110304	Setaria italica	39.09	0.00e+00	640.00
IUUC-Sly-111620	Solanum lycopersicum	42.81	2.00e-134	470.00
IUUC-Stu-112877	Solanum tuberosum	38.93	0.00e+00	651.00
IUUC-Sbi-114702	Sorghum bicolor	39.14	3.00e-180	624.00
IUUC-Sre-115129	Sporisorium reilianum	45.14	0.00e+00	739.00
IUUC-Ssc-115931	Sus scrofa	37.60	3.00e-73	267.00
IUUC-Tgu-116787	Taeniopygia guttata	40.96	0.00e+00	686.00
IUUC-Tru-118218	Takifugu rubripes	41.52	0.00e+00	681.00
IUUC-Tsy-119401	Tarsius syrichta	40.65	2.00e-100	358.00
IUUC-Tni-120046	Tetraodon nigroviridis	41.55	0.00e+00	657.00
IUUC-Tca-121685	Theobroma cacao	38.56	0.00e+00	630.00
IUUC-Tre-122154	Trichoderma reesei	77.60	0.00e+00	1378.00
IUUC-Tvi-122451	Trichoderma virens	77.71	0.00e+00	1367.00
IUUC-Tae-125397	Triticum aestivum	39.29	8.00e-99	353.00
IUUC-Tur-126650	Triticum urartu	39.00	2.00e-164	570.00
IUUC-Tme-127005	Tuber melanosporum	60.12	0.00e+00	1054.00
IUUC-Tbe-128102	Tupaia belangeri	43.88	2.00e-130	457.00
IUUC-Ttr-128259	Tursiops truncatus	42.62	0.00e+00	687.00
IUUC-Uma-129511	Ustilago maydis	45.43	0.00e+00	721.00
IUUC-Vvi-131572	Vitis vinifera	37.64	3.00e-170	590.00
IUUC-Xtr-131776	Xenopus tropicalis	29.29	4.00e-40	157.00
IUUC-Xma-133887	Xiphophorus maculatus	42.15	0.00e+00	686.00
IUUC-Yli-134427	Yarrowia lipolytica	51.84	0.00e+00	930.00
IUUC-Zma-135980	Zea mays	39.50	2.00e-177	614.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence