iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000531

Ensembl Protein ID

EMT25614

UniProt Accession

M8BUI5; M8BUI5_AEGTA

Genbank Protein ID

EMT25614.1

Protein Name

E3 ubiquitin-protein ligase RLIM

Genbank Nucleotide ID

KD514965

Gene Name

F775_09366

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_09366	EMT25614	EMT25614

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-08	36.0	234	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+e+f   d+   l+CgH +h  C+++w       s++  CP+C+
   Q: 234  CSICQEEFeaNDEMGRLGCGHSYHVYCIKQW------LSQKNVCPVCK 275
           ********8844477799*************......999999****7 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAGDRRGGSP TVERRRGIRR LLLPRGEASS SSSSAPLPPP AAPEVGRRKG FASAALRGLG 60
CTSAAASQAY APGAGSAAAA AVRSSADWHG RRKKGKDRRK ERGGGGGGGL VGGGIGGDVW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGGTG ACCGCCGCGG CGGGTCGCCC ACGGTGGAGC GCCGGCGGGG GATCCGGCGC 60
CTCCTGCTGC CACGAGGGGA GGCCTCCTCC TCCTCCTCCT CGGCGCCGCT GCCTCCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0436--Ligase

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

ats:F775_09366

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006238	Arabidopsis lyrata	40.18	3.00e-39	154.00
IUUC-Ath-007538	Arabidopsis thaliana	34.08	2.00e-37	148.00
IUUC-Bdi-014850	Brachypodium distachyon	93.70	4.00e-68	249.00
IUUC-Bol-015289	Brassica oleracea	56.00	1.00e-35	143.00
IUUC-Bra-016878	Brassica rapa	56.20	3.00e-36	144.00
IUUC-Gma-043896	Glycine max	44.04	4.00e-41	161.00
IUUC-Hvu-047759	Hordeum vulgare	99.19	5.00e-72	262.00
IUUC-Lpe-051518	Leersia perrieri	75.86	4.00e-59	221.00
IUUC-Mtr-058459	Medicago truncatula	61.60	1.00e-40	159.00
IUUC-Mac-064656	Musa acuminata	51.01	2.00e-58	218.00
IUUC-Oba-075787	Oryza barthii	88.98	1.00e-64	238.00
IUUC-Obr-076180	Oryza brachyantha	87.30	1.00e-63	234.00
IUUC-Ogl-077027	Oryza glaberrima	88.98	1.00e-64	238.00
IUUC-Ogu-078948	Oryza glumaepatula	88.98	2.00e-64	238.00
IUUC-Oin-079890	Oryza indica	88.98	1.00e-64	238.00
IUUC-Olo-080287	Oryza longistaminata	77.42	4.00e-52	196.00
IUUC-Ome-081811	Oryza meridionalis	88.98	3.00e-64	238.00
IUUC-Oni-082479	Oryza nivara	78.79	5.00e-57	214.00
IUUC-Opu-083327	Oryza punctata	87.29	3.00e-58	218.00
IUUC-Oru-085182	Oryza rufipogon	87.90	2.00e-62	232.00
IUUC-Osa-086292	Oryza sativa	88.98	2.00e-64	238.00
IUUC-Ppa-095214	Physcomitrella patens	48.48	5.00e-36	145.00
IUUC-Pop-099627	Populus trichocarpa	56.91	5.00e-40	157.00
IUUC-Ppe-102027	Prunus persica	45.83	8.00e-45	173.00
IUUC-Smo-108847	Selaginella moellendorffii	50.41	2.00e-35	142.00
IUUC-Sit-110714	Setaria italica	69.28	4.00e-56	211.00
IUUC-Sly-111420	Solanum lycopersicum	63.41	2.00e-43	169.00
IUUC-Stu-112746	Solanum tuberosum	62.60	3.00e-43	168.00
IUUC-Sbi-114151	Sorghum bicolor	85.71	9.00e-62	228.00
IUUC-Tca-121581	Theobroma cacao	45.00	7.00e-47	180.00
IUUC-Tae-122745	Triticum aestivum	100.00	7.00e-72	263.00
IUUC-Tur-126099	Triticum urartu	96.77	3.00e-71	259.00
IUUC-Vvi-131571	Vitis vinifera	43.14	7.00e-44	170.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence