iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.5__2078__AT3G56440.1	fgenesh2_kg.5__2078__AT3G56440.1	fgenesh2_kg.5__2078__AT3G56440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-06	27.8	251	280

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           ++++++a+ ++   l+++sd gt+++++lr
   Q: 251  ADIYSIALsPNmQWLAVSSDKGTVHIFSLR 280
           579******77799*************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDPRRNFQPG GYDSRNTFTS GSFGPPDFGE SDEAELVSVS WNQDYSCFAA GTSHGFRIYN 60
CEPFKETFRR ELKGGGFKIV EMLFRSNILA LVGGGPNSQY PSNKVLIWDD HQSRCISEFT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATGACGACA GTTGACTAAC CCAAACAAAC GAATAAAAAA AGAAAAAAAT CGGAAATTTT 60
CGACGAAATC ATTACAAGTT AGTATTACAG AGACGAACCT TCTCATAGCC AAGTCATTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_486086

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007660	Arabidopsis thaliana	97.44	0.00e+00	771.00
IUUC-Acl-008148	Aspergillus clavatus	30.88	3.00e-43	168.00
IUUC-Ang-009798	Aspergillus niger	30.14	8.00e-44	170.00
IUUC-Bci-013627	Botrytis cinerea	30.07	5.00e-42	164.00
IUUC-Bol-015492	Brassica oleracea	91.76	0.00e+00	687.00
IUUC-Cho-024328	Choloepus hoffmanni	33.86	9.00e-34	137.00
IUUC-Cne-026947	Cryptococcus neoformans	31.60	2.00e-45	175.00
IUUC-Oan-073084	Ornithorhynchus anatinus	32.04	1.00e-34	140.00
IUUC-Pno-094851	Phaeosphaeria nodorum	32.03	9.00e-41	160.00
IUUC-Pgr-103258	Puccinia graminis	31.10	1.00e-39	156.00
IUUC-Ptt-103915	Puccinia triticina	32.57	3.00e-35	142.00
IUUC-Pte-104115	Pyrenophora teres	31.88	6.00e-40	157.00
IUUC-Sja-107913	Schizosaccharomyces japonicus	30.55	4.00e-42	164.00
IUUC-Spo-108068	Schizosaccharomyces pombe	35.44	5.00e-41	160.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence