iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114164

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G169100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g023070	Sb09g023070.1	Sb09g023070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	9.60e-07	29.6	229	285
E3 activity/RING/RING	6.10e-08	33.9	233	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
           + f C I +e+ ++Pvv+++G+ +   ++ +wl   s++k+cPv++ ++te +++P 
   Q: 229  AMFECNICFEMAEEPVVTSCGHLFCWPCLYQWLhvHSSHKECPVCKGEVTEGNITPI 285
           579******************************9989999**************997 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e+ ++ p+v++CgH+f+  Cl++w    ++ s +  CP+C+
   Q: 233  CNICFEMAEE-PVVTSCGHLFCWPCLYQW---LHVHSSHKECPVCK 274
           99******99.999***************...555889999****7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAADDAARSS RRMDLNLYLG LPRAPRARRP DLGSDLALGT PMLSSSSPSS SAASADAPPL 60
ETDPLHPPYS PTRADLVRPP TPAHEPYNPF APEAHPPYVP PPPLPVPGAL PVLADELEFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCTCTCT CTCTCCACCC CGCACCCTTC CCAATTCCCC ATCCTCACCG CCGCCGCCCC 60
CGCCGCCCCC GCAGCCAGGC AGCCACCAAC TCCACCGCAT CCGAAGCCAT AGCCGCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g023070

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000500	Aegilops tauschii	73.76	1.00e-133	468.00
IUUC-Atr-002678	Amborella trichopoda	41.76	3.00e-49	188.00
IUUC-Apl-003744	Anas platyrhynchos	47.06	6.00e-21	91.70
IUUC-Aly-006126	Arabidopsis lyrata	46.10	5.00e-32	130.00
IUUC-Ath-007143	Arabidopsis thaliana	46.72	1.00e-31	130.00
IUUC-Ame-011667	Astyanax mexicanus	50.00	3.00e-19	87.00
IUUC-Bdi-014503	Brachypodium distachyon	68.91	0.00e+00	626.00
IUUC-Bol-015635	Brassica oleracea	47.54	3.00e-32	132.00
IUUC-Bra-017049	Brassica rapa	46.10	7.00e-32	130.00
IUUC-Cne-027043	Cryptococcus neoformans	32.31	5.00e-07	48.50
IUUC-Dme-031912	Drosophila melanogaster	40.18	2.00e-23	101.00
IUUC-Gac-041719	Gasterosteus aculeatus	48.53	2.00e-20	91.30
IUUC-Gma-042913	Glycine max	37.10	6.00e-37	147.00
IUUC-Hvu-047402	Hordeum vulgare	62.74	8.00e-123	433.00
IUUC-Kpa-049300	Komagataella pastoris	38.60	1.00e-08	53.10
IUUC-Lpe-051015	Leersia perrieri	72.41	5.00e-180	623.00
IUUC-Meu-055984	Macropus eugenii	57.81	3.00e-21	93.20
IUUC-Mtr-057874	Medicago truncatula	45.27	6.00e-35	140.00
IUUC-Mac-064953	Musa acuminata	45.75	9.00e-65	240.00
IUUC-Oba-075089	Oryza barthii	71.32	0.00e+00	627.00
IUUC-Obr-076527	Oryza brachyantha	76.90	3.00e-151	527.00
IUUC-Ogl-077589	Oryza glaberrima	71.32	0.00e+00	627.00
IUUC-Ogu-078192	Oryza glumaepatula	72.30	3.00e-172	597.00
IUUC-Oin-079645	Oryza indica	61.77	7.00e-135	473.00
IUUC-Olo-080972	Oryza longistaminata	62.30	9.00e-136	476.00
IUUC-Ome-081574	Oryza meridionalis	72.90	6.00e-173	599.00
IUUC-Oni-082269	Oryza nivara	71.93	5.00e-171	593.00
IUUC-Opu-083703	Oryza punctata	73.08	1.00e-174	605.00
IUUC-Oru-084734	Oryza rufipogon	72.12	8.00e-170	589.00
IUUC-Osa-085691	Oryza sativa	72.12	3.00e-171	594.00
IUUC-Ppa-095235	Physcomitrella patens	79.31	3.00e-29	122.00
IUUC-Pop-099819	Populus trichocarpa	30.68	4.00e-38	151.00
IUUC-Ppe-101193	Prunus persica	39.56	2.00e-36	145.00
IUUC-Sce-106439	Saccharomyces cerevisiae	32.56	7.00e-10	56.60
IUUC-Sit-110715	Setaria italica	87.94	0.00e+00	697.00
IUUC-Sly-111147	Solanum lycopersicum	32.70	1.00e-38	152.00
IUUC-Stu-112419	Solanum tuberosum	32.70	1.00e-38	153.00
IUUC-Tca-121427	Theobroma cacao	47.95	2.00e-34	139.00
IUUC-Tae-125026	Triticum aestivum	64.22	7.00e-164	569.00
IUUC-Tur-126391	Triticum urartu	73.11	1.00e-121	428.00
IUUC-Vvi-131195	Vitis vinifera	52.31	2.00e-36	145.00
IUUC-Xtr-131916	Xenopus tropicalis	43.42	2.00e-21	94.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence