iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098803

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_781319; POPTR_0014s05250g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s05250	POPTR_0014s05250.1	POPTR_0014s05250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.50e-07	31.7	115	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ f  +d +++lp C H+fha+C+  w       + +++CPlCr
   Q: 115  CAVCLSKFepDDLLRLLPlCCHAFHAHCIDTW------VNSNQSCPLCR 157
           ******997766599999**************......9999******8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MVITTKTYHS SSNLNSSILI IILILSITLL VSVSLCFLLR VLNRRCLSHL SPSRTTATTT 60
TITAPSSSNR HSGNNNHRVS PETLEPSISD SLPLFSFSSI KRRSSSSPAI SGGDCAVCLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTAATTA CGACCAAGAC CTATCATTCC AGCAGTGTCA GTCAAATAAT TGGATCAAAA 60
GCTCTTCCTT GTTTGACATG CAAATCCCGA ACGTGCTTTG TCTTCTTCCA TGTTTTTAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0014s05250g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence