iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017964

Ensembl Protein ID

Bra026760.1-P

UniProt Accession

M4EDA0; M4EDA0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026760	Bra026760.1	Bra026760.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-25	89.5	263	296
UBD/Beta-Prp	3.50e-43	148.9	11	212

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           gH ++v+c+++    d +  sGs Dgt+++W++ t
   Q: 263  GHHGPVHCVRYapgGDSY-TSGSEDGTVRIWEVNT 296
           899*********543367.99***********865 PP

UBD/Beta-Prp

   S: 10   ksvitcvkf...spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsf 102
           + ++ +v +   +pd+ +l+++s+d+   + + +tg+ + +++gh+++v+++++++++   +++s D t+k+w+  tg  +h+++ h++ v++++f
   Q: 11   SRPVVDVSYspiTPDGFFLISASKDSVPMLRNGETGDWIGTFEGHKGAVWSCSLDKHAMRAASASADFTAKIWNALTGNELHSFE-HKHIVRACAF 105
           4444456666667899999999988888999999999999999999999999999999999999999999999999999999999.9999999999 PP
   S: 103  spsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvv.hpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvs 197
           s+++++l++G+  + +r++d++      +      g++++v++ h+d+ +l s+++ + +rlWd++++k+++tl+   + +v+s +++++g+++ s
   Q: 106  SQDTHRLLTGGMEKKLRIFDMNRPDAPPKEVGTPPGSIRTVEWlHSDNTILSSCTDTGDIRLWDIRNDKIVQTLET--KFPVTSAEVSQDGRYI-S 198
           9999999999999999999998877766644444445555554155557777788888999999999999999965..8999999999998665.5 PP
   S: 198  gsldgtvklwdlqt 211
            ++ ++vk+wd  +
   Q: 199  TADGSSVKFWDANN 212
           56778999999765 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGVPLVCHGH SRPVVDVSYS PITPDGFFLI SASKDSVPML RNGETGDWIG TFEGHKGAVW 60
SCSLDKHAMR AASASADFTA KIWNALTGNE LHSFEHKHIV RACAFSQDTH RLLTGGMEKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGTTC CATTAGTTTG TCACGGTCAT TCTCGTCCCG TCGTCGATGT CTCGTACAGC 60
CCGATTACTC CAGACGGGTT CTTCCTCATC AGCGCCAGCA AAGGTACGAT CTTTTTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015753	Brassica oleracea	97.92	0.00e+00	687.00
IUUC-Pgr-103581	Puccinia graminis	41.75	5.00e-64	237.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence