iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114397

Ensembl Protein ID

Sb01g000460.1

UniProt Accession

C5WRW3; C5WRW3_SORBI

Genbank Protein ID

EER90473.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G004100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g000460	Sb01g000460.1	Sb01g000460.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-20	72.0	302	332

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH++ vtcl+f ++   ++++s Dg+i+vW+
   Q: 302  GHKSAVTCLCFaPNsEEVITASKDGSIRVWN 332
           8***********777***************9 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAASLVSSLT VPLVSAVLGA AIALVFLAGY LSRKRAAIAH IPPTATAAAP DQPKHVRPSN 60
QAQNKKGHLR AHHHAADKDA AKKHHHLDVN TLRGHTDSVT ALAFSNDAGN LATVCADGAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATCCCTCG CCTCCCCCCG CCCCCCTCCC GTCGTCGACC CGACCTCGAT CCGCCACCGC 60
CCGCCGCAGG AAGCCAAGCC AAGGCCAGAT GGCGGCCTCA CTCGTGTCCT CGCTCACTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

KEGG

sbi:SORBI_01g000450

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000109	Aegilops tauschii	75.49	8.00e-89	318.00
IUUC-Aml-002212	Ailuropoda melanoleuca	28.16	7.00e-36	144.00
IUUC-Atr-002903	Amborella trichopoda	61.00	2.00e-157	547.00
IUUC-Apl-003635	Anas platyrhynchos	30.43	4.00e-36	144.00
IUUC-Aca-004472	Anolis carolinensis	29.75	6.00e-34	137.00
IUUC-Aly-005761	Arabidopsis lyrata	60.89	2.00e-151	528.00
IUUC-Ath-007476	Arabidopsis thaliana	61.61	8.00e-156	542.00
IUUC-Ame-011221	Astyanax mexicanus	30.67	1.00e-39	156.00
IUUC-Bta-013186	Bos taurus	27.98	1.00e-35	143.00
IUUC-Bdi-014298	Brachypodium distachyon	84.75	0.00e+00	684.00
IUUC-Bol-015192	Brassica oleracea	59.82	1.00e-149	521.00
IUUC-Bra-017078	Brassica rapa	60.05	1.00e-150	525.00
IUUC-Cel-018602	Caenorhabditis elegans	26.07	4.00e-24	105.00
IUUC-Cja-018909	Callithrix jacchus	28.53	9.00e-35	140.00
IUUC-Cfa-020970	Canis familiaris	29.33	5.00e-38	150.00
IUUC-Cpo-022215	Cavia porcellus	29.45	1.00e-37	149.00
IUUC-Cre-022949	Chlamydomonas reinhardtii	39.89	2.00e-37	147.00
IUUC-Csa-023530	Chlorocebus sabaeus	29.08	4.00e-37	148.00
IUUC-Cho-024598	Choloepus hoffmanni	29.18	3.00e-23	102.00
IUUC-Cin-025486	Ciona intestinalis	26.17	2.00e-26	112.00
IUUC-Csv-025930	Ciona savignyi	25.27	5.00e-21	94.70
IUUC-Dre-027507	Danio rerio	31.29	4.00e-40	158.00
IUUC-Dno-029726	Dasypus novemcinctus	29.36	3.00e-34	138.00
IUUC-Dor-030501	Dipodomys ordii	34.05	5.00e-29	121.00
IUUC-Ete-032794	Echinops telfairi	33.96	2.00e-29	121.00
IUUC-Eca-033982	Equus caballus	30.43	5.00e-36	144.00
IUUC-Eeu-035090	Erinaceus europaeus	32.23	2.00e-29	122.00
IUUC-Fca-035944	Felis catus	28.95	2.00e-37	149.00
IUUC-Fal-036992	Ficedula albicollis	30.54	5.00e-37	147.00
IUUC-Gmo-038710	Gadus morhua	31.29	1.00e-41	162.00
IUUC-Gga-040885	Gallus gallus	31.66	2.00e-27	115.00
IUUC-Gac-041922	Gasterosteus aculeatus	30.06	2.00e-38	152.00
IUUC-Gma-043534	Glycine max	69.40	2.00e-154	538.00
IUUC-Ggo-045172	Gorilla gorilla	28.44	2.00e-35	142.00
IUUC-Hsa-045711	Homo sapiens	27.89	5.00e-35	141.00
IUUC-Itr-048196	Ictidomys tridecemlineatus	28.57	1.00e-36	146.00
IUUC-Lch-049739	Latimeria chalumnae	29.14	8.00e-39	154.00
IUUC-Lpe-050795	Leersia perrieri	78.08	4.00e-174	603.00
IUUC-Loc-052113	Lepisosteus oculatus	30.77	5.00e-37	147.00
IUUC-Laf-053751	Loxodonta africana	28.07	5.00e-37	147.00
IUUC-Mcc-055022	Macaca mulatta	29.08	4.00e-37	147.00
IUUC-Meu-056003	Macropus eugenii	28.83	4.00e-35	141.00
IUUC-Mtr-058500	Medicago truncatula	67.93	2.00e-152	531.00
IUUC-Mga-059278	Meleagris gallopavo	34.24	5.00e-28	117.00
IUUC-Mmr-061148	Microcebus murinus	29.33	8.00e-39	154.00
IUUC-Mdo-063002	Monodelphis domestica	28.80	2.00e-30	125.00
IUUC-Mmu-063607	Mus musculus	27.65	6.00e-34	137.00
IUUC-Mac-065359	Musa acuminata	69.42	0.00e+00	632.00
IUUC-Mpu-066323	Mustela putorius furo	29.34	4.00e-35	141.00
IUUC-Mlu-067946	Myotis lucifugus	29.17	1.00e-37	149.00
IUUC-Nle-069019	Nomascus leucogenys	27.89	4.00e-35	141.00
IUUC-Opr-071047	Ochotona princeps	28.57	3.00e-36	145.00
IUUC-Ont-071694	Oreochromis niloticus	31.29	3.00e-40	158.00
IUUC-Ocu-074493	Oryctolagus cuniculus	28.13	7.00e-35	140.00
IUUC-Oba-075468	Oryza barthii	87.74	0.00e+00	724.00
IUUC-Obr-076681	Oryza brachyantha	87.02	0.00e+00	627.00
IUUC-Ogl-077870	Oryza glaberrima	87.74	0.00e+00	724.00
IUUC-Ogu-078536	Oryza glumaepatula	87.74	0.00e+00	724.00
IUUC-Oin-080175	Oryza indica	87.74	0.00e+00	724.00
IUUC-Olo-080796	Oryza longistaminata	86.39	0.00e+00	649.00
IUUC-Oni-082076	Oryza nivara	87.74	0.00e+00	724.00
IUUC-Opu-083267	Oryza punctata	88.27	0.00e+00	686.00
IUUC-Oru-084553	Oryza rufipogon	87.50	0.00e+00	722.00
IUUC-Osa-085389	Oryza sativa	87.74	0.00e+00	724.00
IUUC-Ola-086414	Oryzias latipes	30.98	3.00e-40	158.00
IUUC-Oga-088656	Otolemur garnettii	29.03	4.00e-37	148.00
IUUC-Oar-089719	Ovis aries	29.27	8.00e-36	143.00
IUUC-Ptr-091087	Pan troglodytes	27.89	5.00e-35	141.00
IUUC-Pan-091709	Papio anubis	29.08	5.00e-37	147.00
IUUC-Psi-093265	Pelodiscus sinensis	27.99	3.00e-32	132.00
IUUC-Ppa-095365	Physcomitrella patens	54.55	5.00e-123	433.00
IUUC-Pfo-097494	Poecilia formosa	30.67	9.00e-39	153.00
IUUC-Pab-098362	Pongo abelii	28.19	1.00e-35	143.00
IUUC-Pop-099163	Populus trichocarpa	63.59	4.00e-151	526.00
IUUC-Pca-101019	Procavia capensis	33.65	6.00e-30	124.00
IUUC-Ppe-102101	Prunus persica	62.21	4.00e-161	560.00
IUUC-Pva-102849	Pteropus vampyrus	29.75	3.00e-37	148.00
IUUC-Rno-105511	Rattus norvegicus	27.65	4.00e-34	138.00
IUUC-Sha-107265	Sarcophilus harrisii	29.77	1.00e-33	136.00
IUUC-Smo-108866	Selaginella moellendorffii	53.76	5.00e-114	403.00
IUUC-Sit-110806	Setaria italica	91.69	0.00e+00	797.00
IUUC-Sly-110994	Solanum lycopersicum	59.57	1.00e-149	522.00
IUUC-Stu-112493	Solanum tuberosum	65.69	1.00e-109	387.00
IUUC-Sar-113628	Sorex araneus	30.32	1.00e-35	143.00
IUUC-Ssc-116418	Sus scrofa	28.57	9.00e-37	147.00
IUUC-Tgu-117054	Taeniopygia guttata	30.43	2.00e-35	142.00
IUUC-Tru-118504	Takifugu rubripes	29.65	3.00e-41	161.00
IUUC-Tni-120254	Tetraodon nigroviridis	30.95	2.00e-42	165.00
IUUC-Tca-121085	Theobroma cacao	62.35	2.00e-153	534.00
IUUC-Tae-124351	Triticum aestivum	86.35	0.00e+00	653.00
IUUC-Tur-126756	Triticum urartu	76.60	9.00e-168	582.00
IUUC-Tbe-127903	Tupaia belangeri	28.53	2.00e-34	139.00
IUUC-Ttr-129118	Tursiops truncatus	28.45	6.00e-38	150.00
IUUC-Vvi-131125	Vitis vinifera	63.66	5.00e-156	543.00
IUUC-Xtr-132287	Xenopus tropicalis	29.14	9.00e-35	140.00
IUUC-Xma-134246	Xiphophorus maculatus	31.60	3.00e-40	158.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence