iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121085

Ensembl Protein ID

EOX96215

UniProt Accession

A0A061DU33; A0A061DU33_THECC

Genbank Protein ID

EOX96215.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001879

Gene Name

TCM_005513

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_005513	EOX96215	EOX96215

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-14	52.3	83	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH+dsv +l+f sd + l++++ Dg+++v+ l +
   Q: 83   GHADSVAGLCFsSDgRNLATACADGVVRVFKLED 116
           8***********99888*************9876 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDPILSVVAL SVVLGAVIVF VFFKSYFLKQ RSEVQTIAKP ELHSDPKKPS KPPQPIFRKS 60
HAKHHSKDQN KRHHPLDLNT LKGHADSVAG LCFSSDGRNL ATACADGVVR VFKLEDASSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTGTAATTC CTCTCTTTGA TCACAGGCAA AGAATTGTTA CTTCTTCCCT TTGCTAATGG 60
ATCCGATTCT TTCAGTTGTG GCGCTTTCAG TTGTTCTGGG AGCTGTGATC GTTTTCGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0016021--C:integral component of membrane

KEGG

tcc:TCM_005513

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000109	Aegilops tauschii	65.70	5.00e-74	269.00
IUUC-Aml-002212	Ailuropoda melanoleuca	30.95	2.00e-38	152.00
IUUC-Atr-002903	Amborella trichopoda	69.14	9.00e-179	619.00
IUUC-Apl-003635	Anas platyrhynchos	31.44	2.00e-36	145.00
IUUC-Aca-004472	Anolis carolinensis	31.94	2.00e-35	142.00
IUUC-Aly-005761	Arabidopsis lyrata	73.46	0.00e+00	632.00
IUUC-Ath-007476	Arabidopsis thaliana	72.87	0.00e+00	643.00
IUUC-Ame-011221	Astyanax mexicanus	31.68	8.00e-41	160.00
IUUC-Bta-013186	Bos taurus	31.25	1.00e-38	153.00
IUUC-Bdi-014298	Brachypodium distachyon	68.80	5.00e-147	513.00
IUUC-Bol-015192	Brassica oleracea	71.82	0.00e+00	630.00
IUUC-Bra-017078	Brassica rapa	72.75	0.00e+00	635.00
IUUC-Cel-018602	Caenorhabditis elegans	27.57	1.00e-26	113.00
IUUC-Cja-018909	Callithrix jacchus	31.55	6.00e-37	147.00
IUUC-Cfa-020970	Canis familiaris	32.74	2.00e-40	159.00
IUUC-Cpo-022215	Cavia porcellus	30.75	3.00e-37	148.00
IUUC-Cre-022949	Chlamydomonas reinhardtii	42.13	2.00e-38	150.00
IUUC-Csa-023530	Chlorocebus sabaeus	30.65	1.00e-38	153.00
IUUC-Cho-024598	Choloepus hoffmanni	32.19	5.00e-26	111.00
IUUC-Cin-025486	Ciona intestinalis	27.65	6.00e-30	124.00
IUUC-Csv-025930	Ciona savignyi	26.44	6.00e-24	103.00
IUUC-Dre-027507	Danio rerio	31.37	4.00e-40	157.00
IUUC-Dno-029726	Dasypus novemcinctus	31.29	6.00e-37	147.00
IUUC-Dor-030501	Dipodomys ordii	37.30	7.00e-31	127.00
IUUC-Ete-032794	Echinops telfairi	36.46	7.00e-31	126.00
IUUC-Eca-033982	Equus caballus	31.48	2.00e-36	145.00
IUUC-Eeu-035090	Erinaceus europaeus	36.07	6.00e-31	127.00
IUUC-Fca-035944	Felis catus	31.81	8.00e-40	157.00
IUUC-Fal-036992	Ficedula albicollis	31.82	2.00e-35	142.00
IUUC-Gmo-038710	Gadus morhua	31.44	9.00e-39	153.00
IUUC-Gga-040885	Gallus gallus	35.76	3.00e-28	117.00
IUUC-Gac-041922	Gasterosteus aculeatus	31.93	4.00e-39	154.00
IUUC-Gma-044233	Glycine max	77.19	0.00e+00	657.00
IUUC-Ggo-045172	Gorilla gorilla	30.06	8.00e-37	147.00
IUUC-Hsa-045711	Homo sapiens	30.36	1.00e-37	149.00
IUUC-Itr-048196	Ictidomys tridecemlineatus	30.65	9.00e-38	150.00
IUUC-Lch-049739	Latimeria chalumnae	30.06	1.00e-38	153.00
IUUC-Lpe-050795	Leersia perrieri	56.72	6.00e-123	433.00
IUUC-Loc-052113	Lepisosteus oculatus	31.10	8.00e-38	150.00
IUUC-Laf-053751	Loxodonta africana	30.67	5.00e-38	150.00
IUUC-Mcc-055022	Macaca mulatta	30.65	2.00e-38	152.00
IUUC-Meu-056003	Macropus eugenii	29.75	1.00e-36	146.00
IUUC-Mtr-058500	Medicago truncatula	74.60	0.00e+00	635.00
IUUC-Mga-059278	Meleagris gallopavo	38.18	6.00e-29	120.00
IUUC-Mmr-061148	Microcebus murinus	31.85	6.00e-40	157.00
IUUC-Mdo-063002	Monodelphis domestica	30.10	2.00e-33	135.00
IUUC-Mmu-063607	Mus musculus	30.28	7.00e-37	147.00
IUUC-Mac-065359	Musa acuminata	64.63	3.00e-169	587.00
IUUC-Mpu-066323	Mustela putorius furo	30.99	2.00e-37	148.00
IUUC-Mlu-067946	Myotis lucifugus	30.68	8.00e-40	157.00
IUUC-Nle-069019	Nomascus leucogenys	30.36	1.00e-37	150.00
IUUC-Opr-071047	Ochotona princeps	30.51	9.00e-38	150.00
IUUC-Ont-071694	Oreochromis niloticus	33.33	7.00e-41	160.00
IUUC-Ocu-074493	Oryctolagus cuniculus	30.53	3.00e-36	145.00
IUUC-Oba-075468	Oryza barthii	67.63	3.00e-142	497.00
IUUC-Obr-076681	Oryza brachyantha	69.89	1.00e-140	491.00
IUUC-Ogl-077870	Oryza glaberrima	67.63	3.00e-142	497.00
IUUC-Ogu-078536	Oryza glumaepatula	67.63	2.00e-142	497.00
IUUC-Oin-080175	Oryza indica	67.63	3.00e-142	497.00
IUUC-Olo-080796	Oryza longistaminata	68.83	1.00e-141	495.00
IUUC-Oni-082076	Oryza nivara	67.63	3.00e-142	497.00
IUUC-Opu-083267	Oryza punctata	68.68	5.00e-146	509.00
IUUC-Oru-084553	Oryza rufipogon	67.37	1.00e-141	495.00
IUUC-Osa-085389	Oryza sativa	67.63	3.00e-142	497.00
IUUC-Ola-086414	Oryzias latipes	34.16	1.00e-43	170.00
IUUC-Oga-088656	Otolemur garnettii	31.55	1.00e-37	149.00
IUUC-Oar-089719	Ovis aries	31.72	5.00e-39	154.00
IUUC-Ptr-091087	Pan troglodytes	30.36	2.00e-37	149.00
IUUC-Pan-091709	Papio anubis	30.65	2.00e-38	152.00
IUUC-Psi-093265	Pelodiscus sinensis	28.41	1.00e-34	139.00
IUUC-Ppa-095365	Physcomitrella patens	58.74	3.00e-129	454.00
IUUC-Pfo-097494	Poecilia formosa	32.54	7.00e-43	167.00
IUUC-Pab-098362	Pongo abelii	30.65	3.00e-38	152.00
IUUC-Pop-099163	Populus trichocarpa	74.77	0.00e+00	645.00
IUUC-Pca-101019	Procavia capensis	36.98	1.00e-32	133.00
IUUC-Ppe-102101	Prunus persica	75.17	0.00e+00	679.00
IUUC-Pva-102849	Pteropus vampyrus	31.60	2.00e-38	152.00
IUUC-Rno-105511	Rattus norvegicus	30.28	6.00e-37	147.00
IUUC-Sha-107265	Sarcophilus harrisii	28.49	6.00e-35	140.00
IUUC-Smo-108866	Selaginella moellendorffii	57.66	3.00e-122	430.00
IUUC-Sit-110806	Setaria italica	59.59	2.00e-147	514.00
IUUC-Sly-110994	Solanum lycopersicum	70.81	0.00e+00	635.00
IUUC-Stu-112493	Solanum tuberosum	82.48	7.00e-137	478.00
IUUC-Sar-113628	Sorex araneus	32.17	2.00e-38	152.00
IUUC-Sbi-114397	Sorghum bicolor	59.95	9.00e-150	522.00
IUUC-Ssc-116418	Sus scrofa	30.41	3.00e-39	155.00
IUUC-Tgu-117054	Taeniopygia guttata	30.13	5.00e-36	144.00
IUUC-Tru-118504	Takifugu rubripes	32.47	4.00e-43	167.00
IUUC-Tni-120254	Tetraodon nigroviridis	32.65	3.00e-42	165.00
IUUC-Tae-124351	Triticum aestivum	67.69	3.00e-145	507.00
IUUC-Tur-126756	Triticum urartu	59.79	6.00e-127	446.00
IUUC-Tbe-127903	Tupaia belangeri	31.29	2.00e-36	145.00
IUUC-Ttr-129118	Tursiops truncatus	31.59	5.00e-41	160.00
IUUC-Vvi-131125	Vitis vinifera	74.26	0.00e+00	672.00
IUUC-Xtr-132287	Xenopus tropicalis	30.84	6.00e-37	147.00
IUUC-Xma-134246	Xiphophorus maculatus	31.94	9.00e-42	163.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence