iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006135

Ensembl Protein ID

fgenesh1_pm.C_scaffold_6002959

UniProt Accession

D7M5Q4; D7M5Q4_ARALL

Genbank Protein ID

EFH51294.1

Protein Name

Ring-H2 finger B1A

Genbank Nucleotide ID

GL348718

Gene Name

RHB1A; ARALYDRAFT_327739

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_6002959	fgenesh1_pm.C_scaffold_6002959	fgenesh1_pm.C_scaffold_6002959

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.50e-09	36.7	139	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplv.lpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ed+  ++ p++ ++C H fh++Cl  w        +++rCP+C+
   Q: 139  CPICFEDYdvEN-PRLtTNCEHDFHLSCLLGW------IERSDRCPICD 180
           ******998777.665277*************......**********5 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGGCCSSSRK SHLVGTPVYY YCPESFEELG PSGARAGVGS AFTTGLLVDI GLDFSIPDTF 60
CAPAPLPYDL LLGRPQCTDS ESIKGRMSGS SFETLATCED LGEPDCKTQA SSVILSPRQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGAGGTT GCTGTAGTTC TTCGAGGAAG TCGCATCTTG TTGGAACACC TGTTTACTAT 60
TATGTCAGTA ATCCTTTTCA CCATCTTCCA TTTGTGTTGC TTTGCACAAC TGACTATCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_327739

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007231	Arabidopsis thaliana	93.16	2.00e-100	357.00
IUUC-Bol-016007	Brassica oleracea	68.66	5.00e-60	223.00
IUUC-Bra-016854	Brassica rapa	64.89	6.00e-29	117.00
IUUC-Gma-042911	Glycine max	58.64	8.00e-62	228.00
IUUC-Mtr-058420	Medicago truncatula	56.99	7.00e-59	219.00
IUUC-Pop-099699	Populus trichocarpa	60.75	2.00e-61	228.00
IUUC-Ppe-101156	Prunus persica	51.32	8.00e-44	169.00
IUUC-Sly-111641	Solanum lycopersicum	43.46	5.00e-38	149.00
IUUC-Tca-121829	Theobroma cacao	61.78	3.00e-59	220.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence