iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068512

Ensembl Protein ID

CADNFIAP00004125

UniProt Accession

A1DN90; A1DN90_NEOFI

Genbank Protein ID

EAW16261.1

Protein Name

Ribosome biogenesis protein (Rrb1), putative

Genbank Nucleotide ID

DS027698

Gene Name

NFIA_056100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00004253	CADNFIAT00004253	CADNFIAP00004125

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-23	79.9	304	338

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+sv  l++  ++ + ++s+s Dg++kvWD+r+
   Q: 304  GHTSSVEELQWspNErNVFASASSDGSVKVWDVRS 338
           8***********666999**************986 PP

Organism

Neosartorya fischeri

Protein Sequence
(Fasta)

MSKRAADASE EHSTALKAGE RPVADDIPDE VGEFEDEFED EFESEDEILE AGVDGRPDAE 60
REEEEKDAME VDKQTFIPGR TKLAPGEVLS PDPSTYDMLH TLSTPWPCLS FDIVRDSLGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCAAAA GAGCTGCCGA CGCGTCTGAG GAGCACTCCA CTGCTCTCAA GGCCGGAGAG 60
CGGCCGGTGG CCGATGACAT TCCGGACGAG GTGGGGGAGT TCGAAGATGA GTTCGAGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0042254--P:ribosome biogenesis

KEGG

nfi:NFIA_056100

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	35.86	1.00e-65	241.00
IUUC-Aml-002309	Ailuropoda melanoleuca	41.50	1.00e-81	294.00
IUUC-Atr-002461	Amborella trichopoda	40.00	5.00e-78	283.00
IUUC-Aca-004760	Anolis carolinensis	40.94	1.00e-79	288.00
IUUC-Aly-005405	Arabidopsis lyrata	37.47	1.00e-71	261.00
IUUC-Ath-007178	Arabidopsis thaliana	37.78	1.00e-71	261.00
IUUC-Ago-007735	Ashbya gossypii	43.05	2.00e-107	380.00
IUUC-Acl-008294	Aspergillus clavatus	95.36	0.00e+00	894.00
IUUC-Afl-008486	Aspergillus flavus	91.30	0.00e+00	854.00
IUUC-Afu-009019	Aspergillus fumigatus	99.19	0.00e+00	920.00
IUUC-Ani-009465	Aspergillus nidulans	86.12	0.00e+00	777.00
IUUC-Ang-009641	Aspergillus niger	90.12	0.00e+00	830.00
IUUC-Ate-010426	Aspergillus terreus	92.74	0.00e+00	872.00
IUUC-Ame-010856	Astyanax mexicanus	39.32	2.00e-77	280.00
IUUC-Bgr-012258	Blumeria graminis	67.87	2.00e-165	573.00
IUUC-Bta-012437	Bos taurus	40.67	7.00e-80	289.00
IUUC-Bci-013647	Botrytis cinerea	67.61	6.00e-176	608.00
IUUC-Bdi-014728	Brachypodium distachyon	37.58	2.00e-75	274.00
IUUC-Bol-015126	Brassica oleracea	37.44	9.00e-72	262.00
IUUC-Bra-016700	Brassica rapa	40.78	2.00e-40	157.00
IUUC-Cel-018454	Caenorhabditis elegans	36.51	4.00e-75	273.00
IUUC-Cja-018859	Callithrix jacchus	38.92	2.00e-79	287.00
IUUC-Cfa-020912	Canis familiaris	40.65	2.00e-81	294.00
IUUC-Cpo-021368	Cavia porcellus	41.81	3.00e-82	296.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	34.62	1.00e-35	142.00
IUUC-Csa-023599	Chlorocebus sabaeus	40.32	1.00e-79	288.00
IUUC-Cin-025718	Ciona intestinalis	40.97	2.00e-82	298.00
IUUC-Csv-025806	Ciona savignyi	43.30	3.00e-60	223.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	61.42	1.00e-147	514.00
IUUC-Cne-026781	Cryptococcus neoformans	43.58	1.00e-85	308.00
IUUC-Cme-027129	Cyanidioschyzon merolae	32.56	1.00e-36	145.00
IUUC-Dre-028225	Danio rerio	38.16	5.00e-76	276.00
IUUC-Dno-029792	Dasypus novemcinctus	41.01	2.00e-75	274.00
IUUC-Dor-030773	Dipodomys ordii	38.29	6.00e-29	119.00
IUUC-Dse-031289	Dothistroma septosporum	66.20	1.00e-172	597.00
IUUC-Dme-031676	Drosophila melanogaster	37.91	1.00e-76	278.00
IUUC-Eca-033618	Equus caballus	40.32	2.00e-77	281.00
IUUC-Fca-036102	Felis catus	40.84	3.00e-77	280.00
IUUC-Fox-037899	Fusarium oxysporum	67.80	0.00e+00	648.00
IUUC-Fso-038130	Fusarium solani	67.13	0.00e+00	639.00
IUUC-Gmo-038741	Gadus morhua	40.28	5.00e-77	279.00
IUUC-Ggr-040086	Gaeumannomyces graminis	65.88	9.00e-178	614.00
IUUC-Gac-042243	Gasterosteus aculeatus	39.17	5.00e-79	286.00
IUUC-Gma-044177	Glycine max	38.68	1.00e-76	278.00
IUUC-Ggo-044564	Gorilla gorilla	40.64	1.00e-80	291.00
IUUC-Hsa-046021	Homo sapiens	40.09	2.00e-79	287.00
IUUC-Hvu-047721	Hordeum vulgare	36.97	1.00e-70	259.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	41.24	1.00e-79	288.00
IUUC-Kpa-049271	Komagataella pastoris	46.53	4.00e-112	396.00
IUUC-Lch-049974	Latimeria chalumnae	37.42	3.00e-78	283.00
IUUC-Lpe-051388	Leersia perrieri	34.55	3.00e-63	234.00
IUUC-Lma-053010	Leptosphaeria maculans	66.53	3.00e-176	609.00
IUUC-Laf-054058	Loxodonta africana	39.91	3.00e-81	293.00
IUUC-Mcc-055246	Macaca mulatta	40.32	1.00e-79	288.00
IUUC-Meu-056795	Macropus eugenii	38.83	2.00e-74	271.00
IUUC-Mor-057175	Magnaporthe oryzae	63.42	1.00e-172	597.00
IUUC-Mpo-057388	Magnaporthe poae	61.96	2.00e-155	540.00
IUUC-Mtr-057752	Medicago truncatula	36.73	1.00e-72	265.00
IUUC-Mla-058904	Melampsora laricipopulina	43.76	1.00e-85	308.00
IUUC-Mvi-060525	Microbotryum violaceum	43.02	1.00e-79	288.00
IUUC-Mmr-060905	Microcebus murinus	41.91	1.00e-80	291.00
IUUC-Mmu-063428	Mus musculus	41.23	5.00e-81	293.00
IUUC-Mac-065276	Musa acuminata	38.29	2.00e-72	265.00
IUUC-Mpu-066062	Mustela putorius furo	41.72	3.00e-81	293.00
IUUC-Mlu-068115	Myotis lucifugus	48.91	2.00e-56	210.00
IUUC-Ncr-068629	Neurospora crassa	66.87	4.00e-179	619.00
IUUC-Nle-070016	Nomascus leucogenys	41.59	3.00e-81	293.00
IUUC-Ont-072230	Oreochromis niloticus	39.86	6.00e-77	279.00
IUUC-Oan-072759	Ornithorhynchus anatinus	28.98	5.00e-46	176.00
IUUC-Ocu-074511	Oryctolagus cuniculus	40.48	6.00e-76	276.00
IUUC-Oba-075093	Oryza barthii	34.91	4.00e-64	237.00
IUUC-Obr-076130	Oryza brachyantha	36.34	2.00e-71	261.00
IUUC-Ogl-077397	Oryza glaberrima	36.71	4.00e-73	266.00
IUUC-Ogu-078140	Oryza glumaepatula	35.99	7.00e-62	231.00
IUUC-Oin-079162	Oryza indica	35.14	1.00e-65	242.00
IUUC-Olo-080909	Oryza longistaminata	30.62	2.00e-46	178.00
IUUC-Ome-081768	Oryza meridionalis	35.19	6.00e-63	233.00
IUUC-Oni-082453	Oryza nivara	34.91	6.00e-65	240.00
IUUC-Opu-084133	Oryza punctata	34.78	6.00e-59	220.00
IUUC-Oru-085056	Oryza rufipogon	34.31	8.00e-53	199.00
IUUC-Osa-085735	Oryza sativa	36.71	3.00e-73	267.00
IUUC-Ola-087066	Oryzias latipes	40.46	1.00e-72	265.00
IUUC-Olu-087594	Ostreococcus lucimarinus	37.39	2.00e-72	264.00
IUUC-Oga-087974	Otolemur garnettii	41.32	4.00e-80	290.00
IUUC-Oar-089902	Ovis aries	40.67	4.00e-79	286.00
IUUC-Ptr-090469	Pan troglodytes	39.40	2.00e-77	281.00
IUUC-Pan-092858	Papio anubis	40.32	1.00e-79	288.00
IUUC-Psi-094092	Pelodiscus sinensis	33.16	2.00e-35	141.00
IUUC-Pno-094919	Phaeosphaeria nodorum	66.53	1.00e-160	557.00
IUUC-Ppa-095849	Physcomitrella patens	35.17	5.00e-72	263.00
IUUC-Pfo-096535	Poecilia formosa	39.86	2.00e-77	281.00
IUUC-Pab-098478	Pongo abelii	40.32	6.00e-80	289.00
IUUC-Pop-100032	Populus trichocarpa	40.78	1.00e-76	278.00
IUUC-Pca-100403	Procavia capensis	48.82	8.00e-63	231.00
IUUC-Ppe-101997	Prunus persica	39.46	1.00e-77	281.00
IUUC-Pva-102423	Pteropus vampyrus	42.44	8.00e-82	295.00
IUUC-Pgr-103339	Puccinia graminis	39.37	7.00e-82	296.00
IUUC-Ptt-103937	Puccinia triticina	40.32	2.00e-81	294.00
IUUC-Pte-104051	Pyrenophora teres	66.13	6.00e-167	578.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	67.33	3.00e-169	586.00
IUUC-Rno-106118	Rattus norvegicus	41.29	3.00e-78	284.00
IUUC-Sce-106330	Saccharomyces cerevisiae	45.39	4.00e-106	376.00
IUUC-Sha-106564	Sarcophilus harrisii	39.22	4.00e-61	226.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	44.08	7.00e-103	365.00
IUUC-Spo-108351	Schizosaccharomyces pombe	46.32	5.00e-108	382.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	70.04	3.00e-177	612.00
IUUC-Smo-109619	Selaginella moellendorffii	36.75	2.00e-72	264.00
IUUC-Sit-109857	Setaria italica	36.12	2.00e-68	251.00
IUUC-Sly-111245	Solanum lycopersicum	36.32	2.00e-65	241.00
IUUC-Stu-112645	Solanum tuberosum	37.10	3.00e-70	257.00
IUUC-Sar-113342	Sorex araneus	40.48	1.00e-73	268.00
IUUC-Sbi-114359	Sorghum bicolor	35.67	6.00e-69	253.00
IUUC-Sre-115098	Sporisorium reilianum	45.60	6.00e-90	323.00
IUUC-Ssc-115496	Sus scrofa	41.91	5.00e-81	293.00
IUUC-Tru-117662	Takifugu rubripes	39.12	5.00e-76	276.00
IUUC-Tni-120564	Tetraodon nigroviridis	38.36	2.00e-61	228.00
IUUC-Tca-121710	Theobroma cacao	37.75	2.00e-77	280.00
IUUC-Tre-122239	Trichoderma reesei	65.67	4.00e-174	602.00
IUUC-Tvi-122589	Trichoderma virens	66.80	3.00e-175	605.00
IUUC-Tae-125574	Triticum aestivum	37.61	8.00e-76	276.00
IUUC-Tur-126135	Triticum urartu	39.51	2.00e-57	214.00
IUUC-Tme-127073	Tuber melanosporum	52.30	3.00e-122	430.00
IUUC-Ttr-128383	Tursiops truncatus	41.78	2.00e-77	281.00
IUUC-Uma-129345	Ustilago maydis	45.62	6.00e-96	342.00
IUUC-Vda-129893	Verticillium dahliae	66.33	0.00e+00	633.00
IUUC-Vvi-131067	Vitis vinifera	40.18	7.00e-80	289.00
IUUC-Xtr-132603	Xenopus tropicalis	40.68	3.00e-82	297.00
IUUC-Xma-133149	Xiphophorus maculatus	40.32	7.00e-78	282.00
IUUC-Yli-134459	Yarrowia lipolytica	46.90	3.00e-113	400.00
IUUC-Zma-135548	Zea mays	36.34	3.00e-70	257.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence