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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007438
UUCD1 version UUC-ArT-00095
Ensembl Protein ID AT1G63900.1
UniProt Accession Q8L7N4; Q9CAK2; Q9CAK3; SP1_ARATH
Genbank Protein ID AAG52446.1; AAG52461.1; AEE34164.1; AAM91555.1; AAN15327.1; BAD43976.1; BAD44518.1; AAY57589.1
Protein Name E3 ubiquitin-protein ligase SP1; DIAP1-like protein 1; Protein SUPPRESSOR OF PPI1 LOCUS 1; RING-type E3 ubiquitin transferase SP1
Genbank Nucleotide ID AC010852; AC010852; CP002684; AY128352; BT000008; AK176213; AK176755; DQ059103
Gene Name SP1; DIAL1; At1g63900/At1g63890; T12P18.8/T12P18.9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G63900 AT1G63900.2 AT1G63900.2
AT1G63900 AT1G63900.1 AT1G63900.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexPINAHINTMentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 28.94 6.00e-22 102.00 IUUC-Hsa-046597
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     E3 ubiquitin-protein ligase involved in the regulation of protein import in the chloroplast. Associates with TOC complexes and mediates ubiquitination of TOC components, promoting their degradation via the ubiquitin-proteasome system (UPS). Plays a role in the reorganization of the TOC machinery. Involved in a mechanism that regulates plastid biogenesis via UPS (PubMed:23118188). Promotes stress tolerance by depleting the chloroplast protein import apparatus, which limits photosystem assembly and the potential for reactive oxygen species (ROS) formation (PubMed:26387714). May act as negative regulator of programmed cell death (PCD) during biotic stress (PubMed:20972793).
 E3 ubiquitin-protein ligase involved in the regulation of protein import in the chloroplast. Associates with TOC complexes and mediates ubiquitination of TOC components, promoting their degradation via the ubiquitin-proteasome system (UPS). Plays a role in the reorganization of the TOC machinery. Involved in a mechanism that regulates plastid biogenesis via UPS (PubMed:23118188). Promotes stress tolerance by depleting the chloroplast protein import apparatus, which limits photosystem assembly and the potential for reactive oxygen species (ROS) formation (PubMed:26387714). May act as negative regulator of programmed cell death (PCD) during biotic stress (PubMed:20972793).
Protein Sequence
(Fasta)
MIPWGGVTCC LSAAALYLLG RSSGRDAEVL ETVTRVNQLK ELAQLLELDS KILPFIVAVS 60
GRVGSETPIK CEHSGIRGVI VEETAEQHFL KHNETGSWVQ DSALMLSMSK EVPWFLDDGT 120
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Protein Fasta Sequence


>IUUC-Ath-007438|E3,RING|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
GAAGTGGCCA CGTCATCAGC TTCGTTGCTT GGGGACTATA TCGTCGTCTT CCCCAAACCC 60
TGCGCATGAG AATATTGAGA GAGATCGAAG CAAAGGATCA TTCAATTCCA ACCCTCTGAA 120
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Nucleotide Fasta Sequence


>IUUC-Ath-007438|E3,RING|Arabidopsis thaliana
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Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0150--Chloroplast
KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0934--Plastid
KW-1002--Plastid outer membrane
KW-1185--Reference proteome
KW-0346--Stress response
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001370--BIR_rpt
IPR022170--GIDE
IPR001841--Znf_RING
PROSITE

PS50089--ZF_RING_2
Pfam

PF12483--GIDE
Gene Ontology

GO:0009707--C:chloroplast outer membrane
GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0006996--P:organelle organization
GO:1904215--P:regulation of protein import into chloroplast stroma
KEGG ath:AT1G63900
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000342 Aegilops tauschii 67.74 9.00e-121 427.00
IUUC-Aml-002287 Ailuropoda melanoleuca 27.79 2.00e-20 92.40
IUUC-Atr-002698 Amborella trichopoda 25.41 3.00e-12 65.50
IUUC-Apl-003704 Anas platyrhynchos 46.81 3.00e-11 62.40
IUUC-Aca-005039 Anolis carolinensis 23.01 1.00e-13 70.10
IUUC-Aly-006181 Arabidopsis lyrata 98.25 0.00e+00 680.00
IUUC-Acl-008281 Aspergillus clavatus 46.94 2.00e-10 61.60
IUUC-Afl-008647 Aspergillus flavus 46.94 5.00e-10 60.10
IUUC-Afu-009000 Aspergillus fumigatus 46.94 1.00e-10 62.00
IUUC-Ani-009211 Aspergillus nidulans 46.94 2.00e-10 61.20
IUUC-Ate-010322 Aspergillus terreus 48.98 6.00e-11 63.20
IUUC-Ame-010671 Astyanax mexicanus 24.78 8.00e-15 73.90
IUUC-Bta-012407 Bos taurus 29.77 9.00e-21 93.60
IUUC-Bdi-014735 Brachypodium distachyon 69.10 7.00e-132 462.00
IUUC-Bol-015493 Brassica oleracea 90.99 1.00e-180 624.00
IUUC-Bra-016933 Brassica rapa 91.57 6.00e-174 602.00
IUUC-Cja-019709 Callithrix jacchus 28.53 1.00e-20 93.20
IUUC-Cfa-020818 Canis familiaris 28.65 5.00e-22 97.80
IUUC-Cpo-022490 Cavia porcellus 28.57 2.00e-21 95.50
IUUC-Csa-023259 Chlorocebus sabaeus 28.94 2.00e-23 102.00
IUUC-Cho-024730 Choloepus hoffmanni 27.99 2.00e-22 99.00
IUUC-Cin-025301 Ciona intestinalis 24.92 7.00e-18 84.00
IUUC-Csv-025837 Ciona savignyi 39.13 5.00e-09 55.10
IUUC-Dre-028644 Danio rerio 26.62 5.00e-16 77.80
IUUC-Dno-028925 Dasypus novemcinctus 27.30 4.00e-22 98.20
IUUC-Dor-030692 Dipodomys ordii 28.08 4.00e-22 97.80
IUUC-Dme-031761 Drosophila melanogaster 22.96 4.00e-13 68.20
IUUC-Ete-032329 Echinops telfairi 26.64 7.00e-16 77.40
IUUC-Eca-034008 Equus caballus 28.03 1.00e-21 96.70
IUUC-Eeu-035048 Erinaceus europaeus 48.94 3.00e-11 62.40
IUUC-Fca-036104 Felis catus 28.20 1.00e-21 96.30
IUUC-Fal-036900 Ficedula albicollis 27.27 2.00e-18 85.90
IUUC-Gmo-039049 Gadus morhua 28.16 1.00e-08 53.10
IUUC-Gga-040254 Gallus gallus 26.73 4.00e-20 91.70
IUUC-Gac-042277 Gasterosteus aculeatus 25.73 1.00e-15 76.60
IUUC-Gma-043979 Glycine max 75.51 3.00e-140 490.00
IUUC-Ggo-045509 Gorilla gorilla 28.94 2.00e-23 102.00
IUUC-Hsa-046597 Homo sapiens 28.94 2.00e-23 102.00
IUUC-Hvu-047335 Hordeum vulgare 69.40 7.00e-108 382.00
IUUC-Itr-048691 Ictidomys tridecemlineatus 28.08 1.00e-21 96.30
IUUC-Lch-050344 Latimeria chalumnae 26.67 3.00e-20 92.00
IUUC-Lpe-051343 Leersia perrieri 73.46 1.00e-112 398.00
IUUC-Loc-052376 Lepisosteus oculatus 26.09 3.00e-17 82.00
IUUC-Laf-054414 Loxodonta africana 28.65 7.00e-23 100.00
IUUC-Mcc-054604 Macaca mulatta 28.94 2.00e-23 102.00
IUUC-Meu-056087 Macropus eugenii 27.70 3.00e-19 88.60
IUUC-Mtr-057779 Medicago truncatula 69.97 7.00e-139 486.00
IUUC-Mga-060188 Meleagris gallopavo 26.42 7.00e-19 87.00
IUUC-Mmr-060704 Microcebus murinus 28.08 1.00e-21 96.70
IUUC-Mdo-062842 Monodelphis domestica 26.96 5.00e-17 81.30
IUUC-Mmu-064324 Mus musculus 27.79 1.00e-19 90.10
IUUC-Mpu-065940 Mustela putorius furo 28.29 2.00e-21 95.50
IUUC-Mlu-067028 Myotis lucifugus 28.37 2.00e-23 102.00
IUUC-Nfi-068377 Neosartorya fischeri 44.90 1.00e-09 58.90
IUUC-Nle-069254 Nomascus leucogenys 27.14 1.00e-20 93.20
IUUC-Opr-070827 Ochotona princeps 27.51 4.00e-21 94.70
IUUC-Ont-072008 Oreochromis niloticus 24.27 3.00e-16 78.60
IUUC-Oan-072935 Ornithorhynchus anatinus 28.86 6.00e-21 94.40
IUUC-Ocu-074526 Oryctolagus cuniculus 28.08 7.00e-20 90.50
IUUC-Oba-075954 Oryza barthii 70.13 7.00e-122 429.00
IUUC-Obr-076592 Oryza brachyantha 72.01 7.00e-144 502.00
IUUC-Ogl-077732 Oryza glaberrima 71.72 1.00e-143 501.00
IUUC-Ogu-078565 Oryza glumaepatula 70.32 6.00e-125 439.00
IUUC-Oin-080188 Oryza indica 71.72 1.00e-143 501.00
IUUC-Olo-080705 Oryza longistaminata 26.67 5.00e-11 61.60
IUUC-Ome-081154 Oryza meridionalis 70.65 1.00e-123 435.00
IUUC-Oni-082201 Oryza nivara 70.13 7.00e-122 429.00
IUUC-Opu-083497 Oryza punctata 66.18 8.00e-125 439.00
IUUC-Oru-084332 Oryza rufipogon 70.13 7.00e-122 429.00
IUUC-Osa-086059 Oryza sativa 72.97 8.00e-112 395.00
IUUC-Ola-087288 Oryzias latipes 23.19 6.00e-11 60.80
IUUC-Oga-088402 Otolemur garnettii 28.37 2.00e-22 99.40
IUUC-Ptr-091226 Pan troglodytes 28.65 3.00e-23 101.00
IUUC-Pan-092575 Papio anubis 28.94 3.00e-23 102.00
IUUC-Psi-094062 Pelodiscus sinensis 26.30 1.00e-17 83.60
IUUC-Pma-094501 Petromyzon marinus 26.30 1.00e-06 46.60
IUUC-Ppa-095285 Physcomitrella patens 61.93 2.00e-117 414.00
IUUC-Pfo-096146 Poecilia formosa 22.35 4.00e-12 65.10
IUUC-Pab-098524 Pongo abelii 28.94 2.00e-23 102.00
IUUC-Pop-099864 Populus trichocarpa 68.80 3.00e-136 477.00
IUUC-Pca-100314 Procavia capensis 28.94 6.00e-23 100.00
IUUC-Ppe-101663 Prunus persica 74.34 2.00e-139 487.00
IUUC-Pva-102947 Pteropus vampyrus 28.08 7.00e-22 97.10
IUUC-Rno-105024 Rattus norvegicus 29.14 9.00e-22 97.10
IUUC-Smo-109194 Selaginella moellendorffii 66.47 6.00e-136 476.00
IUUC-Sit-109922 Setaria italica 72.30 1.00e-136 478.00
IUUC-Sly-111826 Solanum lycopersicum 72.89 3.00e-136 477.00
IUUC-Stu-112907 Solanum tuberosum 73.47 3.00e-137 480.00
IUUC-Sar-113522 Sorex araneus 28.97 1.00e-18 85.90
IUUC-Sbi-114536 Sorghum bicolor 72.30 4.00e-146 509.00
IUUC-Ssc-115445 Sus scrofa 28.08 5.00e-19 87.80
IUUC-Tgu-116551 Taeniopygia guttata 26.25 4.00e-17 81.60
IUUC-Tru-118407 Takifugu rubripes 26.83 8.00e-15 73.90
IUUC-Tsy-118794 Tarsius syrichta 26.72 2.00e-16 79.30
IUUC-Tni-120007 Tetraodon nigroviridis 48.65 2.70e-01 29.30
IUUC-Tca-121508 Theobroma cacao 79.01 1.00e-154 538.00
IUUC-Tae-125185 Triticum aestivum 68.80 1.00e-140 491.00
IUUC-Tur-126470 Triticum urartu 68.51 2.00e-140 490.00
IUUC-Tbe-127432 Tupaia belangeri 26.93 9.00e-19 87.00
IUUC-Ttr-128573 Tursiops truncatus 28.94 1.00e-20 92.80
IUUC-Vpa-130583 Vicugna pacos 28.25 2.00e-20 92.00
IUUC-Vvi-131710 Vitis vinifera 73.47 6.00e-141 493.00
IUUC-Xtr-132009 Xenopus tropicalis 25.58 1.00e-18 86.70
IUUC-Xma-134121 Xiphophorus maculatus 23.71 6.00e-15 74.30
Created Date 25-Jun-2017

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