iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017406

Ensembl Protein ID

Bra027146.1-P

UniProt Accession

M4EED4; M4EED4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027146	Bra027146.1	Bra027146.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-14	53.1	169	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H+ +++ +++  ++ +l++++s D t  +WDlrt
   Q: 169  HKYRIHTIDLnpQNpHLMATSSQDRTACLWDLRT 202
           888999****97555888**************98 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MTKRRFDKVE HFDKDSGSDS SCFSSDSDPE EAEESEEEVS EEGDESPADV DDDEPPEEEE 60
EHYILGCMIK CQPGYECRYC PFITCPNERT MRAHVSSRVI TSSYDGLIRL MDVEKMVFDL 120

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Nucleotide Sequence
(Fasta)

ATGACAAAGA GACGATTTGA CAAGGTTGAG CATTTTGATA AAGACAGTGG ATCAGACTCA 60
TCTTGCTTCT CTTCTGATTC TGATCCTGAG GAGGCAGAAG AATCCGAAGA GGAAGTTTCT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence