iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002983

Ensembl Protein ID

ERN11177

UniProt Accession

W1PMF2; W1PMF2_AMBTC

Genbank Protein ID

ERN11177.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392710

Gene Name

AMTR_s00024p00200570

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00024p00200570	ERN11177	ERN11177

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.70e-08	34.3	201	251

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cge++++++  ++C++C++wfH +C+k++     +  +++ Cp C+s
   Q: 201  TLCGACGENYASDEFWICCDICEKWFHGKCVKIT-PARAEHIKQYKCPTCSS 251
           68************99******************.666666677******86 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MDAAAGPYNP RTVEEVFKDF KGRRNGMIKA LTTDVEEFYQ QCDPEKENLC LYGYPNESWE 60
VNLPAEEVPP ELPEPALGIN FARDGMQEKD WLSLVAVHSD AWLLSVAFYF GARFGFDKND 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGCTG CAGCTGGTCC GTACAACCCT AGGACTGTGG AGGAAGTGTT CAAGGATTTT 60
AAGGGGAGGA GAAACGGGAT GATTAAGGCT CTCACCACTG GTGAGTTTTC CCTCAGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

atr:18439367

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005868	Arabidopsis lyrata	69.64	4.00e-84	302.00
IUUC-Ath-007447	Arabidopsis thaliana	69.64	2.00e-84	303.00
IUUC-Acl-008106	Aspergillus clavatus	44.68	9.00e-07	48.10
IUUC-Bdi-014599	Brachypodium distachyon	67.77	2.00e-85	307.00
IUUC-Bol-015206	Brassica oleracea	68.48	5.00e-80	289.00
IUUC-Bra-016659	Brassica rapa	68.87	1.00e-80	291.00
IUUC-Gma-044204	Glycine max	77.91	3.00e-91	326.00
IUUC-Kpa-049384	Komagataella pastoris	35.71	4.00e-07	48.50
IUUC-Mtr-057868	Medicago truncatula	72.73	1.00e-90	324.00
IUUC-Oba-075443	Oryza barthii	67.82	9.00e-82	295.00
IUUC-Ogl-077821	Oryza glaberrima	67.82	1.00e-81	295.00
IUUC-Ogu-078707	Oryza glumaepatula	67.94	3.00e-82	296.00
IUUC-Ome-082006	Oryza meridionalis	68.34	3.00e-82	296.00
IUUC-Oni-083045	Oryza nivara	67.82	6.00e-82	296.00
IUUC-Opu-083864	Oryza punctata	65.47	9.00e-81	291.00
IUUC-Oru-084648	Oryza rufipogon	67.82	9.00e-82	295.00
IUUC-Osa-085794	Oryza sativa	67.82	9.00e-82	295.00
IUUC-Olu-087829	Ostreococcus lucimarinus	63.83	1.00e-41	162.00
IUUC-Ppa-095899	Physcomitrella patens	71.43	8.00e-83	298.00
IUUC-Pop-099768	Populus trichocarpa	84.50	3.00e-95	339.00
IUUC-Ppe-101390	Prunus persica	80.23	3.00e-93	333.00
IUUC-Sit-110822	Setaria italica	86.33	3.00e-58	217.00
IUUC-Sly-111824	Solanum lycopersicum	81.32	2.00e-88	317.00
IUUC-Stu-112184	Solanum tuberosum	74.81	3.00e-86	310.00
IUUC-Tca-121679	Theobroma cacao	80.80	1.00e-90	324.00
IUUC-Tae-125833	Triticum aestivum	66.30	3.00e-84	303.00
IUUC-Vvi-130848	Vitis vinifera	79.92	4.00e-93	332.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence