iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099086

Ensembl Protein ID

POPTR_0004s02160.1

UniProt Accession

B9H1H2; B9H1H2_POPTR

Genbank Protein ID

EEE86124.2

Protein Name

Ubiquitin family protein

Genbank Nucleotide ID

CM000340

Gene Name

POPTRDRAFT_713574; POPTR_0004s02160g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0004s02160	POPTR_0004s02160.1	POPTR_0004s02160.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_PIM	2.20e-31	108.7	2	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_PIM

   S: 2    kltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           ++ +   +g  f +ev   dtv+e Kek+ k  g+p+++q L++ G++L+Dd+ ++ + i ++s + l++++
   Q: 2    DVIFEPQRGGPFSIEVGFFDTVSEIKEKVHKYHGIPINKQTLVFHGQVLQDDKDVEYCEILQNSRIQLLITP 73
           55555566667999******************************************************9986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDVIFEPQRG GPFSIEVGFF DTVSEIKEKV HKYHGIPINK QTLVFHGQVL QDDKDVEYCE 60
ILQNSRIQLL ITPETDQIPQ DKVEQTSHSK KVQLRIKIPS NQTLVPLEMD MSDTVLHLKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGTCA TTTTTGAGCC CCAAAGAGGC GGGCCATTCT CCATTGAAGT GGGTTTCTTT 60
GATACAGTCT CGGAGATCAA AGAGAAGGTA CACAAGTACC ATGGTATACC TATAAACAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

pop:POPTR_0004s02160g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000418	Aegilops tauschii	31.45	4.00e-32	130.00
IUUC-Aly-006255	Arabidopsis lyrata	42.93	1.00e-37	149.00
IUUC-Ath-007341	Arabidopsis thaliana	42.19	2.00e-37	148.00
IUUC-Bdi-014814	Brachypodium distachyon	28.00	2.00e-13	68.20
IUUC-Bol-015457	Brassica oleracea	43.46	3.00e-37	147.00
IUUC-Bra-016985	Brassica rapa	43.23	1.00e-35	142.00
IUUC-Gma-043557	Glycine max	59.48	6.00e-81	293.00
IUUC-Hvu-047481	Hordeum vulgare	33.21	3.00e-33	134.00
IUUC-Lpe-051654	Leersia perrieri	48.10	3.00e-15	74.30
IUUC-Mtr-057824	Medicago truncatula	55.76	3.00e-76	277.00
IUUC-Mac-065110	Musa acuminata	43.88	3.00e-36	144.00
IUUC-Oba-075216	Oryza barthii	45.95	2.00e-12	63.90
IUUC-Obr-076204	Oryza brachyantha	59.57	1.00e-13	69.30
IUUC-Ogl-077464	Oryza glaberrima	31.99	2.00e-34	139.00
IUUC-Ogu-078789	Oryza glumaepatula	31.65	3.00e-34	137.00
IUUC-Oin-079834	Oryza indica	32.86	6.00e-32	130.00
IUUC-Olo-080392	Oryza longistaminata	46.15	7.00e-08	50.80
IUUC-Ome-081807	Oryza meridionalis	50.00	7.00e-18	84.00
IUUC-Oni-082949	Oryza nivara	50.00	5.00e-18	84.30
IUUC-Opu-083919	Oryza punctata	32.44	5.00e-32	130.00
IUUC-Oru-084806	Oryza rufipogon	31.77	8.00e-32	130.00
IUUC-Ppe-101213	Prunus persica	57.89	4.00e-85	306.00
IUUC-Sit-109925	Setaria italica	32.75	9.00e-29	120.00
IUUC-Sly-110909	Solanum lycopersicum	49.48	2.00e-64	238.00
IUUC-Sbi-113850	Sorghum bicolor	35.54	3.00e-19	88.20
IUUC-Tca-121426	Theobroma cacao	70.52	1.00e-94	338.00
IUUC-Tae-124982	Triticum aestivum	33.80	2.00e-32	132.00
IUUC-Tur-126620	Triticum urartu	32.33	6.00e-27	113.00
IUUC-Vvi-131330	Vitis vinifera	53.29	7.00e-76	276.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence