iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015636

Ensembl Protein ID

Bo9g152230.1

UniProt Accession

A0A0D3EDW6; A0A0D3EDW6_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo9g152230	Bo9g152230.1	Bo9g152230.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-13	51.3	237	274

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt ++++la+  s+ +l+++++ Dg+++ W l ++++
   Q: 237  GHTKRMRSLALspSNrDLFATSALDGVVHFWKLQSDRS 274
           8***********8779****************999875 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAMKKPKVEQ GEEAKTLSTQ IPDDKEGLID FMDQRANSIE ALKDQLSNLE RKLAEERRLM 60
ADAEAKFLRV DRVENKKNVP GKTGSLLGIA EFWTERDKVK KTATNGTSTP HPPSEMKPLK 120

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Nucleotide Sequence
(Fasta)

ATGGCGATGA AGAAACCGAA AGTTGAGCAA GGGGAAGAAG CAAAGACGCT GTCAACTCAA 60
ATCCCAGATG ATAAAGAAGG TCTTATAGAT TTCATGGACC AGCGTGCCAA CTCCATCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR008831--Mediator_Med31
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05669--Med31
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016592--C:mediator complex
GO:0001104--F:RNA polymerase II transcription cofactor activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006060	Arabidopsis lyrata	67.07	0.00e+00	863.00
IUUC-Ath-006865	Arabidopsis thaliana	66.97	0.00e+00	853.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence