iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016314

Ensembl Protein ID

Bo9g173490.1

UniProt Accession

A0A0D3EGK4; A0A0D3EGK4_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo9g173490	Bo9g173490.1	Bo9g173490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-34	117.3	91	127
UBD/Beta-Prp	6.10e-69	234.0	9	308

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH d+++ ++f ++ + +vs+sdD ti++W++ + ++
   Q: 91   GHLDRIRTVQFhHEkPWIVSASDDQTIRIWNWQSRTC 127
           8**********97789***************987766 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg 106
           +++++ + f++++++++ +  +g i++wd++  +++r++ +he++v+ v ++++++++v+g++D+ i vw+++t  c+ tl gh d++++++f+ ++
   Q: 9    SDRVNGLSFHRKRPWILFSLHSGVIQLWDYRLRTMIRRFVEHEGPVRGVHIHNSRPWFVSGGDDYKIIVWNYNTHMCLFTLLGHLDRIRTVQFHHEK 105
           6788999****************************************************************************************** PP
   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..........ktgkllrtltgghtdsvyslsfdsngk 193
            ++vs+s+d+tir+w++++++c++ +l+gh++  +c+++hp+++l+vs+s D tvr+Wd+          + + +++   +gh++ v++ sf+++ +
   Q: 106  PWIVSASDDQTIRIWNWQSRTCIS-VLTGHNHYAMCASFHPKEDLVVSASSDHTVRVWDItslgnktaspADDAIVKYVLEGHDRGVNWASFHPTLP 201
           ************************.****************************************99885444444444556*************** PP
   S: 194  elvsgsldgtvklwdlq...tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgseds 287
            +vsgs+d+++klw +    + e+v+tl+gh dnv+sv f+ +++ ++s s+D+ i +Wd ++++  +t+q ++ + +  av +++ n l++g  ds
   Q: 202  LIVSGSDDQQIKLWRMNetkAWEVVDTLRGHIDNVSSVIFHAKQDMIISSSEDKRICVWDATKRTKFHTYQCERFRTWVLAV-HPEINLLAAG-HDS 296
           *****************6555566**********************************************************.6666655544.689 PP
   S: 288  kvniwklkknep 299
              ++k+++++p
   Q: 297  GMAVFKFERERP 308
           ******998775 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MLIKLDIKSD RVNGLSFHRK RPWILFSLHS GVIQLWDYRL RTMIRRFVEH EGPVRGVHIH 60
NSRPWFVSGG DDYKIIVWNY NTHMCLFTLL GHLDRIRTVQ FHHEKPWIVS ASDDQTIRIW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTGATCA AATTGGATAT AAAGAGTGAC CGAGTCAATG GCCTAAGCTT CCACCGTAAA 60
AGACCATGGA TTCTCTTCAG TTTACACAGT GGTGTTATCC AGCTCTGGGA TTATCGGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence