iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005732

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348716

Gene Name

RHC2A; ARALYDRAFT_903223

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_402724.1	scaffold_402724.1	scaffold_402724.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-06	29.0	202	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e f  +   + +pC+H++h dC+  w         + +CP+Cr
   Q: 202  CAVCKENFvlQSSAREMPCNHIYHPDCILPW------LAIRNSCPVCR 243
           ********7733366799*************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MASGSYWCYS CSRFVWVSDS LSCPDCDGGF LEHIQETLDF TPSDSFHRLT TTTQHRSPTR 60
FPPSSSSSST PSASMHASTA ENSPTPTTVT RTRSNRSPNP VIVLRGSGAP SDVSEGLDRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTTCATAT CCCTATTCCC ATGGCTTCTG GATCTTACTG GTGTTATAGT TGTAGCCGAT 60
TCGTTTGGGT TTCCGATTCT CTCTCTTGCC CTGATTGCGA CGGTGGTTTC CTCGAACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR010543--DUF1117
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF06547--DUF1117
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_903223

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003131	Amborella trichopoda	48.22	2.00e-63	235.00
IUUC-Ath-007009	Arabidopsis thaliana	88.83	2.00e-135	474.00
IUUC-Bol-015584	Brassica oleracea	69.86	7.00e-123	432.00
IUUC-Bra-017979	Brassica rapa	72.51	3.00e-117	414.00
IUUC-Mtr-057892	Medicago truncatula	48.12	2.00e-66	245.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence